Gene : Thecc1EG005145 T. cacao v1.1
Defline:  (1 of 3) PTHR23056:SF45 - CALCINEURIN B-LIKE PROTEIN 4 Genomic Order:  3398
Name:  ? Thecc1EG005145 Secondary Identifier:  ? PAC:27436292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005145 0.5kb upstream 0.5kb upstream 4419 true scaffold_1: 35281853-35286271 Theobroma cacao
Thecc1EG005145 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35285772-35286271 Theobroma cacao
Thecc1EG005145 0.5kb downstream 0.5kb downstream 4419 true scaffold_1: 35281353-35285771 Theobroma cacao
Thecc1EG005145 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35281353-35281852 Theobroma cacao
Thecc1EG005145 1.0kb upstream 1.0kb upstream 4919 true scaffold_1: 35281853-35286771 Theobroma cacao
Thecc1EG005145 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35285772-35286771 Theobroma cacao
Thecc1EG005145 1.0kb downstream 1.0kb downstream 4919 true scaffold_1: 35280853-35285771 Theobroma cacao
Thecc1EG005145 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35280853-35281852 Theobroma cacao
Thecc1EG005145 2.0kb upstream 2.0kb upstream 5919 true scaffold_1: 35281853-35287771 Theobroma cacao
Thecc1EG005145 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35285772-35287771 Theobroma cacao
Thecc1EG005145 2.0kb downstream 2.0kb downstream 5919 true scaffold_1: 35279853-35285771 Theobroma cacao
Thecc1EG005145 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35279853-35281852 Theobroma cacao
Thecc1EG005145 5.0kb upstream 5.0kb upstream 8919 true scaffold_1: 35281853-35290771 Theobroma cacao
Thecc1EG005145 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35285772-35290771 Theobroma cacao
Thecc1EG005145 5.0kb downstream 5.0kb downstream 8919 true scaffold_1: 35276853-35285771 Theobroma cacao
Thecc1EG005145 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35276853-35281852 Theobroma cacao
Thecc1EG005145 10.0kb upstream 10.0kb upstream 13919 true scaffold_1: 35281853-35295771 Theobroma cacao
Thecc1EG005145 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35285772-35295771 Theobroma cacao
Thecc1EG005145 10.0kb downstream 10.0kb downstream 13919 true scaffold_1: 35271853-35285771 Theobroma cacao
Thecc1EG005145 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35271853-35281852 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842240 5264 Brassicales-Malvales View MSA
124350101 5266 SBM View MSA
124249927 5268 Malvidae View MSA
124065494 5270 Rosid View MSA
123741791 5271 Pentapetalae View MSA
122789949 5272 Eudicot View MSA
122051597 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350709 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain