Gene : Thecc1EG005131 T. cacao v1.1

Defline:  (1 of 1) PTHR11514//PTHR11514:SF47 - MYC // TRANSCRIPTION FACTOR ABA-INDUCIBLE BHLH-TYPE-RELATED Genomic Order:  3387
Name:  ? Thecc1EG005131 Secondary Identifier:  ? PAC:27436689

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005131 0.5kb upstream 0.5kb upstream 4004 true scaffold_1: 35231427-35235430 Theobroma cacao
Thecc1EG005131 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35231427-35231926 Theobroma cacao
Thecc1EG005131 0.5kb downstream 0.5kb downstream 4004 true scaffold_1: 35231927-35235930 Theobroma cacao
Thecc1EG005131 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35235431-35235930 Theobroma cacao
Thecc1EG005131 1.0kb upstream 1.0kb upstream 4504 true scaffold_1: 35230927-35235430 Theobroma cacao
Thecc1EG005131 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35230927-35231926 Theobroma cacao
Thecc1EG005131 1.0kb downstream 1.0kb downstream 4504 true scaffold_1: 35231927-35236430 Theobroma cacao
Thecc1EG005131 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35235431-35236430 Theobroma cacao
Thecc1EG005131 2.0kb upstream 2.0kb upstream 5504 true scaffold_1: 35229927-35235430 Theobroma cacao
Thecc1EG005131 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35229927-35231926 Theobroma cacao
Thecc1EG005131 2.0kb downstream 2.0kb downstream 5504 true scaffold_1: 35231927-35237430 Theobroma cacao
Thecc1EG005131 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35235431-35237430 Theobroma cacao
Thecc1EG005131 5.0kb upstream 5.0kb upstream 8504 true scaffold_1: 35226927-35235430 Theobroma cacao
Thecc1EG005131 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35226927-35231926 Theobroma cacao
Thecc1EG005131 5.0kb downstream 5.0kb downstream 8504 true scaffold_1: 35231927-35240430 Theobroma cacao
Thecc1EG005131 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35235431-35240430 Theobroma cacao
Thecc1EG005131 10.0kb upstream 10.0kb upstream 13504 true scaffold_1: 35221927-35235430 Theobroma cacao
Thecc1EG005131 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35221927-35231926 Theobroma cacao
Thecc1EG005131 10.0kb downstream 10.0kb downstream 13504 true scaffold_1: 35231927-35245430 Theobroma cacao
Thecc1EG005131 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35235431-35245430 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841251 5264 Brassicales-Malvales View MSA
124346242 5266 SBM View MSA
124237618 5268 Malvidae View MSA
124067031 5270 Rosid View MSA
123743665 5271 Pentapetalae View MSA
122788988 5272 Eudicot View MSA
122049389 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain