Gene : Thecc1EG005117 T. cacao v1.1
Defline:  (1 of 4) PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Genomic Order:  3376
Name:  ? Thecc1EG005117 Secondary Identifier:  ? PAC:27431407
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-621 Theobroma cacao pathologic  
Tcacao PWY66-373 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005117 0.5kb upstream 0.5kb upstream 4951 true scaffold_1: 35125796-35130746 Theobroma cacao
Thecc1EG005117 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35130247-35130746 Theobroma cacao
Thecc1EG005117 0.5kb downstream 0.5kb downstream 4951 true scaffold_1: 35125296-35130246 Theobroma cacao
Thecc1EG005117 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35125296-35125795 Theobroma cacao
Thecc1EG005117 1.0kb upstream 1.0kb upstream 5451 true scaffold_1: 35125796-35131246 Theobroma cacao
Thecc1EG005117 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35130247-35131246 Theobroma cacao
Thecc1EG005117 1.0kb downstream 1.0kb downstream 5451 true scaffold_1: 35124796-35130246 Theobroma cacao
Thecc1EG005117 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35124796-35125795 Theobroma cacao
Thecc1EG005117 2.0kb upstream 2.0kb upstream 6451 true scaffold_1: 35125796-35132246 Theobroma cacao
Thecc1EG005117 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35130247-35132246 Theobroma cacao
Thecc1EG005117 2.0kb downstream 2.0kb downstream 6451 true scaffold_1: 35123796-35130246 Theobroma cacao
Thecc1EG005117 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35123796-35125795 Theobroma cacao
Thecc1EG005117 5.0kb upstream 5.0kb upstream 9451 true scaffold_1: 35125796-35135246 Theobroma cacao
Thecc1EG005117 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35130247-35135246 Theobroma cacao
Thecc1EG005117 5.0kb downstream 5.0kb downstream 9451 true scaffold_1: 35120796-35130246 Theobroma cacao
Thecc1EG005117 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35120796-35125795 Theobroma cacao
Thecc1EG005117 10.0kb upstream 10.0kb upstream 14451 true scaffold_1: 35125796-35140246 Theobroma cacao
Thecc1EG005117 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35130247-35140246 Theobroma cacao
Thecc1EG005117 10.0kb downstream 10.0kb downstream 14451 true scaffold_1: 35115796-35130246 Theobroma cacao
Thecc1EG005117 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35115796-35125795 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121519230 5273 Angiosperm Singleton cluster - no MSA
123816180 5264 Brassicales-Malvales Singleton cluster - no MSA
124312585 5266 SBM Singleton cluster - no MSA
124161746 5268 Malvidae Singleton cluster - no MSA
123885692 5270 Rosid Singleton cluster - no MSA
123468238 5271 Pentapetalae Singleton cluster - no MSA
122503535 5272 Eudicot Singleton cluster - no MSA
120792042 5274 Embryophyte Singleton cluster - no MSA
122833658 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain