Gene : Thecc1EG005109 T. cacao v1.1
Defline:  (1 of 24) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  3368
Name:  ? Thecc1EG005109 Secondary Identifier:  ? PAC:27432596
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005109 0.5kb upstream 0.5kb upstream 2658 true scaffold_1: 35070936-35073593 Theobroma cacao
Thecc1EG005109 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35073094-35073593 Theobroma cacao
Thecc1EG005109 0.5kb downstream 0.5kb downstream 2658 true scaffold_1: 35070436-35073093 Theobroma cacao
Thecc1EG005109 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35070436-35070935 Theobroma cacao
Thecc1EG005109 1.0kb upstream 1.0kb upstream 3158 true scaffold_1: 35070936-35074093 Theobroma cacao
Thecc1EG005109 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35073094-35074093 Theobroma cacao
Thecc1EG005109 1.0kb downstream 1.0kb downstream 3158 true scaffold_1: 35069936-35073093 Theobroma cacao
Thecc1EG005109 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35069936-35070935 Theobroma cacao
Thecc1EG005109 2.0kb upstream 2.0kb upstream 4158 true scaffold_1: 35070936-35075093 Theobroma cacao
Thecc1EG005109 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35073094-35075093 Theobroma cacao
Thecc1EG005109 2.0kb downstream 2.0kb downstream 4158 true scaffold_1: 35068936-35073093 Theobroma cacao
Thecc1EG005109 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35068936-35070935 Theobroma cacao
Thecc1EG005109 5.0kb upstream 5.0kb upstream 7158 true scaffold_1: 35070936-35078093 Theobroma cacao
Thecc1EG005109 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35073094-35078093 Theobroma cacao
Thecc1EG005109 5.0kb downstream 5.0kb downstream 7158 true scaffold_1: 35065936-35073093 Theobroma cacao
Thecc1EG005109 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35065936-35070935 Theobroma cacao
Thecc1EG005109 10.0kb upstream 10.0kb upstream 12158 true scaffold_1: 35070936-35083093 Theobroma cacao
Thecc1EG005109 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35073094-35083093 Theobroma cacao
Thecc1EG005109 10.0kb downstream 10.0kb downstream 12158 true scaffold_1: 35060936-35073093 Theobroma cacao
Thecc1EG005109 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35060936-35070935 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836909 5264 Brassicales-Malvales View MSA
124337054 5266 SBM View MSA
124250910 5268 Malvidae View MSA
124061639 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain