Gene : Thecc1EG005091 T. cacao v1.1
Defline:  (1 of 12) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  3353
Name:  ? Thecc1EG005091 Secondary Identifier:  ? PAC:27437424
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005091 0.5kb upstream 0.5kb upstream 2785 true scaffold_1: 35005007-35007791 Theobroma cacao
Thecc1EG005091 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35005007-35005506 Theobroma cacao
Thecc1EG005091 0.5kb downstream 0.5kb downstream 2785 true scaffold_1: 35005507-35008291 Theobroma cacao
Thecc1EG005091 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35007792-35008291 Theobroma cacao
Thecc1EG005091 1.0kb upstream 1.0kb upstream 3285 true scaffold_1: 35004507-35007791 Theobroma cacao
Thecc1EG005091 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35004507-35005506 Theobroma cacao
Thecc1EG005091 1.0kb downstream 1.0kb downstream 3285 true scaffold_1: 35005507-35008791 Theobroma cacao
Thecc1EG005091 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35007792-35008791 Theobroma cacao
Thecc1EG005091 2.0kb upstream 2.0kb upstream 4285 true scaffold_1: 35003507-35007791 Theobroma cacao
Thecc1EG005091 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35003507-35005506 Theobroma cacao
Thecc1EG005091 2.0kb downstream 2.0kb downstream 4285 true scaffold_1: 35005507-35009791 Theobroma cacao
Thecc1EG005091 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35007792-35009791 Theobroma cacao
Thecc1EG005091 5.0kb upstream 5.0kb upstream 7285 true scaffold_1: 35000507-35007791 Theobroma cacao
Thecc1EG005091 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35000507-35005506 Theobroma cacao
Thecc1EG005091 5.0kb downstream 5.0kb downstream 7285 true scaffold_1: 35005507-35012791 Theobroma cacao
Thecc1EG005091 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35007792-35012791 Theobroma cacao
Thecc1EG005091 10.0kb upstream 10.0kb upstream 12285 true scaffold_1: 34995507-35007791 Theobroma cacao
Thecc1EG005091 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34995507-35005506 Theobroma cacao
Thecc1EG005091 10.0kb downstream 10.0kb downstream 12285 true scaffold_1: 35005507-35017791 Theobroma cacao
Thecc1EG005091 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35007792-35017791 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828922 5264 Brassicales-Malvales View MSA
124342598 5266 SBM View MSA
124240970 5268 Malvidae View MSA
124065803 5270 Rosid View MSA
123740464 5271 Pentapetalae View MSA
122788678 5272 Eudicot View MSA
122043135 5273 Angiosperm View MSA
121310078 5274 Embryophyte View MSA
123347667 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain