Gene : Thecc1EG005065 T. cacao v1.1
Defline:  (1 of 1) PTHR23177:SF24 - RHO GTPASE-ACTIVATING PROTEIN 3-RELATED Genomic Order:  3337
Name:  ? Thecc1EG005065 Secondary Identifier:  ? PAC:27436836
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005065 0.5kb upstream 0.5kb upstream 5140 true scaffold_1: 34888085-34893224 Theobroma cacao
Thecc1EG005065 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34892725-34893224 Theobroma cacao
Thecc1EG005065 0.5kb downstream 0.5kb downstream 5140 true scaffold_1: 34887585-34892724 Theobroma cacao
Thecc1EG005065 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34887585-34888084 Theobroma cacao
Thecc1EG005065 1.0kb upstream 1.0kb upstream 5640 true scaffold_1: 34888085-34893724 Theobroma cacao
Thecc1EG005065 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34892725-34893724 Theobroma cacao
Thecc1EG005065 1.0kb downstream 1.0kb downstream 5640 true scaffold_1: 34887085-34892724 Theobroma cacao
Thecc1EG005065 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34887085-34888084 Theobroma cacao
Thecc1EG005065 2.0kb upstream 2.0kb upstream 6640 true scaffold_1: 34888085-34894724 Theobroma cacao
Thecc1EG005065 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34892725-34894724 Theobroma cacao
Thecc1EG005065 2.0kb downstream 2.0kb downstream 6640 true scaffold_1: 34886085-34892724 Theobroma cacao
Thecc1EG005065 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34886085-34888084 Theobroma cacao
Thecc1EG005065 5.0kb upstream 5.0kb upstream 9640 true scaffold_1: 34888085-34897724 Theobroma cacao
Thecc1EG005065 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34892725-34897724 Theobroma cacao
Thecc1EG005065 5.0kb downstream 5.0kb downstream 9640 true scaffold_1: 34883085-34892724 Theobroma cacao
Thecc1EG005065 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34883085-34888084 Theobroma cacao
Thecc1EG005065 10.0kb upstream 10.0kb upstream 14640 true scaffold_1: 34888085-34902724 Theobroma cacao
Thecc1EG005065 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34892725-34902724 Theobroma cacao
Thecc1EG005065 10.0kb downstream 10.0kb downstream 14640 true scaffold_1: 34878085-34892724 Theobroma cacao
Thecc1EG005065 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34878085-34888084 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831672 5264 Brassicales-Malvales View MSA
124345448 5266 SBM View MSA
124251543 5268 Malvidae View MSA
124066975 5270 Rosid View MSA
123741878 5271 Pentapetalae View MSA
122795435 5272 Eudicot View MSA
122041800 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain