Gene : Thecc1EG005047 T. cacao v1.1
Defline:  (1 of 1) PTHR31989//PTHR31989:SF45 - FAMILY NOT NAMED // NAC DOMAIN-CONTAINING PROTEIN 43-RELATED Genomic Order:  3323
Name:  ? Thecc1EG005047 Secondary Identifier:  ? PAC:27437190
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005047 0.5kb upstream 0.5kb upstream 2834 true scaffold_1: 34784609-34787442 Theobroma cacao
Thecc1EG005047 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34784609-34785108 Theobroma cacao
Thecc1EG005047 0.5kb downstream 0.5kb downstream 2834 true scaffold_1: 34785109-34787942 Theobroma cacao
Thecc1EG005047 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34787443-34787942 Theobroma cacao
Thecc1EG005047 1.0kb upstream 1.0kb upstream 3334 true scaffold_1: 34784109-34787442 Theobroma cacao
Thecc1EG005047 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34784109-34785108 Theobroma cacao
Thecc1EG005047 1.0kb downstream 1.0kb downstream 3334 true scaffold_1: 34785109-34788442 Theobroma cacao
Thecc1EG005047 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34787443-34788442 Theobroma cacao
Thecc1EG005047 2.0kb upstream 2.0kb upstream 4334 true scaffold_1: 34783109-34787442 Theobroma cacao
Thecc1EG005047 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34783109-34785108 Theobroma cacao
Thecc1EG005047 2.0kb downstream 2.0kb downstream 4334 true scaffold_1: 34785109-34789442 Theobroma cacao
Thecc1EG005047 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34787443-34789442 Theobroma cacao
Thecc1EG005047 5.0kb upstream 5.0kb upstream 7334 true scaffold_1: 34780109-34787442 Theobroma cacao
Thecc1EG005047 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34780109-34785108 Theobroma cacao
Thecc1EG005047 5.0kb downstream 5.0kb downstream 7334 true scaffold_1: 34785109-34792442 Theobroma cacao
Thecc1EG005047 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34787443-34792442 Theobroma cacao
Thecc1EG005047 10.0kb upstream 10.0kb upstream 12334 true scaffold_1: 34775109-34787442 Theobroma cacao
Thecc1EG005047 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34775109-34785108 Theobroma cacao
Thecc1EG005047 10.0kb downstream 10.0kb downstream 12334 true scaffold_1: 34785109-34797442 Theobroma cacao
Thecc1EG005047 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34787443-34797442 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828405 5264 Brassicales-Malvales View MSA
124340072 5266 SBM View MSA
124253736 5268 Malvidae View MSA
124064226 5270 Rosid View MSA
123752763 5271 Pentapetalae View MSA
122791711 5272 Eudicot View MSA
122049306 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain