Gene : Thecc1EG005053 T. cacao v1.1
Defline:  (1 of 1) PTHR31561//PTHR31561:SF1 - FAMILY NOT NAMED // 3-KETOACYL-COA SYNTHASE 1-RELATED Genomic Order:  3329
Name:  ? Thecc1EG005053 Secondary Identifier:  ? PAC:27433591
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5080 Theobroma cacao pathologic  
Tcacao PWY-6433 Theobroma cacao pathologic  
Tcacao PWY-6598 Theobroma cacao pathologic  
Tcacao PWY-7036 Theobroma cacao pathologic  
Tcacao PWY-7601 Theobroma cacao pathologic  
Tcacao PWY-7606 Theobroma cacao pathologic  
Tcacao PWY-7619 Theobroma cacao pathologic  
Tcacao PWY-7726 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005053 0.5kb upstream 0.5kb upstream 3266 true scaffold_1: 34822369-34825634 Theobroma cacao
Thecc1EG005053 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34825135-34825634 Theobroma cacao
Thecc1EG005053 0.5kb downstream 0.5kb downstream 3266 true scaffold_1: 34821869-34825134 Theobroma cacao
Thecc1EG005053 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34821869-34822368 Theobroma cacao
Thecc1EG005053 1.0kb upstream 1.0kb upstream 3766 true scaffold_1: 34822369-34826134 Theobroma cacao
Thecc1EG005053 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34825135-34826134 Theobroma cacao
Thecc1EG005053 1.0kb downstream 1.0kb downstream 3766 true scaffold_1: 34821369-34825134 Theobroma cacao
Thecc1EG005053 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34821369-34822368 Theobroma cacao
Thecc1EG005053 2.0kb upstream 2.0kb upstream 4766 true scaffold_1: 34822369-34827134 Theobroma cacao
Thecc1EG005053 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34825135-34827134 Theobroma cacao
Thecc1EG005053 2.0kb downstream 2.0kb downstream 4766 true scaffold_1: 34820369-34825134 Theobroma cacao
Thecc1EG005053 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34820369-34822368 Theobroma cacao
Thecc1EG005053 5.0kb upstream 5.0kb upstream 7766 true scaffold_1: 34822369-34830134 Theobroma cacao
Thecc1EG005053 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34825135-34830134 Theobroma cacao
Thecc1EG005053 5.0kb downstream 5.0kb downstream 7766 true scaffold_1: 34817369-34825134 Theobroma cacao
Thecc1EG005053 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34817369-34822368 Theobroma cacao
Thecc1EG005053 10.0kb upstream 10.0kb upstream 12766 true scaffold_1: 34822369-34835134 Theobroma cacao
Thecc1EG005053 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34825135-34835134 Theobroma cacao
Thecc1EG005053 10.0kb downstream 10.0kb downstream 12766 true scaffold_1: 34812369-34825134 Theobroma cacao
Thecc1EG005053 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34812369-34822368 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836168 5264 Brassicales-Malvales View MSA
124350063 5266 SBM View MSA
124238409 5268 Malvidae View MSA
124063458 5270 Rosid View MSA
123736386 5271 Pentapetalae View MSA
122785995 5272 Eudicot View MSA
122048379 5273 Angiosperm View MSA
121310944 5274 Embryophyte View MSA
123348313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain