Gene : Thecc1EG005319 T. cacao v1.1
Defline:  (1 of 2) PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED Genomic Order:  3553
Name:  ? Thecc1EG005319 Secondary Identifier:  ? PAC:27433402
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005319 0.5kb upstream 0.5kb upstream 8007 true scaffold_1: 36096860-36104866 Theobroma cacao
Thecc1EG005319 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36096860-36097359 Theobroma cacao
Thecc1EG005319 0.5kb downstream 0.5kb downstream 8007 true scaffold_1: 36097360-36105366 Theobroma cacao
Thecc1EG005319 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36104867-36105366 Theobroma cacao
Thecc1EG005319 1.0kb upstream 1.0kb upstream 8507 true scaffold_1: 36096360-36104866 Theobroma cacao
Thecc1EG005319 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36096360-36097359 Theobroma cacao
Thecc1EG005319 1.0kb downstream 1.0kb downstream 8507 true scaffold_1: 36097360-36105866 Theobroma cacao
Thecc1EG005319 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36104867-36105866 Theobroma cacao
Thecc1EG005319 2.0kb upstream 2.0kb upstream 9507 true scaffold_1: 36095360-36104866 Theobroma cacao
Thecc1EG005319 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36095360-36097359 Theobroma cacao
Thecc1EG005319 2.0kb downstream 2.0kb downstream 9507 true scaffold_1: 36097360-36106866 Theobroma cacao
Thecc1EG005319 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36104867-36106866 Theobroma cacao
Thecc1EG005319 5.0kb upstream 5.0kb upstream 12507 true scaffold_1: 36092360-36104866 Theobroma cacao
Thecc1EG005319 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36092360-36097359 Theobroma cacao
Thecc1EG005319 5.0kb downstream 5.0kb downstream 12507 true scaffold_1: 36097360-36109866 Theobroma cacao
Thecc1EG005319 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36104867-36109866 Theobroma cacao
Thecc1EG005319 10.0kb upstream 10.0kb upstream 17507 true scaffold_1: 36087360-36104866 Theobroma cacao
Thecc1EG005319 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36087360-36097359 Theobroma cacao
Thecc1EG005319 10.0kb downstream 10.0kb downstream 17507 true scaffold_1: 36097360-36114866 Theobroma cacao
Thecc1EG005319 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36104867-36114866 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
123828719 5264 Brassicales-Malvales View MSA
124351073 5266 SBM View MSA
124247968 5268 Malvidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain