Gene : Thecc1EG005311 T. cacao v1.1
Defline:  (1 of 1) PTHR34797:SF1 - EXPRESSED PROTEIN Genomic Order:  3547
Name:  ? Thecc1EG005311 Secondary Identifier:  ? PAC:27433586
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005311 0.5kb upstream 0.5kb upstream 3922 true scaffold_1: 36062811-36066732 Theobroma cacao
Thecc1EG005311 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36062811-36063310 Theobroma cacao
Thecc1EG005311 0.5kb downstream 0.5kb downstream 3922 true scaffold_1: 36063311-36067232 Theobroma cacao
Thecc1EG005311 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36066733-36067232 Theobroma cacao
Thecc1EG005311 1.0kb upstream 1.0kb upstream 4422 true scaffold_1: 36062311-36066732 Theobroma cacao
Thecc1EG005311 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36062311-36063310 Theobroma cacao
Thecc1EG005311 1.0kb downstream 1.0kb downstream 4422 true scaffold_1: 36063311-36067732 Theobroma cacao
Thecc1EG005311 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36066733-36067732 Theobroma cacao
Thecc1EG005311 2.0kb upstream 2.0kb upstream 5422 true scaffold_1: 36061311-36066732 Theobroma cacao
Thecc1EG005311 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36061311-36063310 Theobroma cacao
Thecc1EG005311 2.0kb downstream 2.0kb downstream 5422 true scaffold_1: 36063311-36068732 Theobroma cacao
Thecc1EG005311 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36066733-36068732 Theobroma cacao
Thecc1EG005311 5.0kb upstream 5.0kb upstream 8422 true scaffold_1: 36058311-36066732 Theobroma cacao
Thecc1EG005311 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36058311-36063310 Theobroma cacao
Thecc1EG005311 5.0kb downstream 5.0kb downstream 8422 true scaffold_1: 36063311-36071732 Theobroma cacao
Thecc1EG005311 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36066733-36071732 Theobroma cacao
Thecc1EG005311 10.0kb upstream 10.0kb upstream 13422 true scaffold_1: 36053311-36066732 Theobroma cacao
Thecc1EG005311 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36053311-36063310 Theobroma cacao
Thecc1EG005311 10.0kb downstream 10.0kb downstream 13422 true scaffold_1: 36063311-36076732 Theobroma cacao
Thecc1EG005311 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36066733-36076732 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041192 5273 Angiosperm View MSA
123837297 5264 Brassicales-Malvales View MSA
124341426 5266 SBM View MSA
124251662 5268 Malvidae View MSA
124069169 5270 Rosid View MSA
123746892 5271 Pentapetalae View MSA
122786328 5272 Eudicot View MSA
121349557 5274 Embryophyte View MSA
123381356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain