Gene : Thecc1EG005306 T. cacao v1.1
Defline:  (1 of 1) PTHR10799//PTHR10799:SF577 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // PROTEIN TAF-3, ISOFORM A Genomic Order:  3542
Name:  ? Thecc1EG005306 Secondary Identifier:  ? PAC:27434847
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005306 0.5kb upstream 0.5kb upstream 12700 true scaffold_1: 36031708-36044407 Theobroma cacao
Thecc1EG005306 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36043908-36044407 Theobroma cacao
Thecc1EG005306 0.5kb downstream 0.5kb downstream 12700 true scaffold_1: 36031208-36043907 Theobroma cacao
Thecc1EG005306 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36031208-36031707 Theobroma cacao
Thecc1EG005306 1.0kb upstream 1.0kb upstream 13200 true scaffold_1: 36031708-36044907 Theobroma cacao
Thecc1EG005306 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36043908-36044907 Theobroma cacao
Thecc1EG005306 1.0kb downstream 1.0kb downstream 13200 true scaffold_1: 36030708-36043907 Theobroma cacao
Thecc1EG005306 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36030708-36031707 Theobroma cacao
Thecc1EG005306 2.0kb upstream 2.0kb upstream 14200 true scaffold_1: 36031708-36045907 Theobroma cacao
Thecc1EG005306 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36043908-36045907 Theobroma cacao
Thecc1EG005306 2.0kb downstream 2.0kb downstream 14200 true scaffold_1: 36029708-36043907 Theobroma cacao
Thecc1EG005306 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36029708-36031707 Theobroma cacao
Thecc1EG005306 5.0kb upstream 5.0kb upstream 17200 true scaffold_1: 36031708-36048907 Theobroma cacao
Thecc1EG005306 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36043908-36048907 Theobroma cacao
Thecc1EG005306 5.0kb downstream 5.0kb downstream 17200 true scaffold_1: 36026708-36043907 Theobroma cacao
Thecc1EG005306 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36026708-36031707 Theobroma cacao
Thecc1EG005306 10.0kb upstream 10.0kb upstream 22200 true scaffold_1: 36031708-36053907 Theobroma cacao
Thecc1EG005306 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36043908-36053907 Theobroma cacao
Thecc1EG005306 10.0kb downstream 10.0kb downstream 22200 true scaffold_1: 36021708-36043907 Theobroma cacao
Thecc1EG005306 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36021708-36031707 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839207 5264 Brassicales-Malvales View MSA
124350968 5266 SBM View MSA
124246961 5268 Malvidae View MSA
124061210 5270 Rosid View MSA
123746200 5271 Pentapetalae View MSA
122788143 5272 Eudicot View MSA
122044493 5273 Angiosperm View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain