Gene : Thecc1EG005296 T. cacao v1.1
Defline:  (1 of 3) K08506 - syntaxin of plants SYP7 (SYP7) Genomic Order:  3532
Name:  ? Thecc1EG005296 Secondary Identifier:  ? PAC:27432581
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005296 0.5kb upstream 0.5kb upstream 3215 true scaffold_1: 35977097-35980311 Theobroma cacao
Thecc1EG005296 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35979812-35980311 Theobroma cacao
Thecc1EG005296 0.5kb downstream 0.5kb downstream 3215 true scaffold_1: 35976597-35979811 Theobroma cacao
Thecc1EG005296 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35976597-35977096 Theobroma cacao
Thecc1EG005296 1.0kb upstream 1.0kb upstream 3715 true scaffold_1: 35977097-35980811 Theobroma cacao
Thecc1EG005296 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35979812-35980811 Theobroma cacao
Thecc1EG005296 1.0kb downstream 1.0kb downstream 3715 true scaffold_1: 35976097-35979811 Theobroma cacao
Thecc1EG005296 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35976097-35977096 Theobroma cacao
Thecc1EG005296 2.0kb upstream 2.0kb upstream 4715 true scaffold_1: 35977097-35981811 Theobroma cacao
Thecc1EG005296 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35979812-35981811 Theobroma cacao
Thecc1EG005296 2.0kb downstream 2.0kb downstream 4715 true scaffold_1: 35975097-35979811 Theobroma cacao
Thecc1EG005296 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35975097-35977096 Theobroma cacao
Thecc1EG005296 5.0kb upstream 5.0kb upstream 7715 true scaffold_1: 35977097-35984811 Theobroma cacao
Thecc1EG005296 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35979812-35984811 Theobroma cacao
Thecc1EG005296 5.0kb downstream 5.0kb downstream 7715 true scaffold_1: 35972097-35979811 Theobroma cacao
Thecc1EG005296 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35972097-35977096 Theobroma cacao
Thecc1EG005296 10.0kb upstream 10.0kb upstream 12715 true scaffold_1: 35977097-35989811 Theobroma cacao
Thecc1EG005296 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35979812-35989811 Theobroma cacao
Thecc1EG005296 10.0kb downstream 10.0kb downstream 12715 true scaffold_1: 35967097-35979811 Theobroma cacao
Thecc1EG005296 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35967097-35977096 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825377 5264 Brassicales-Malvales View MSA
124347415 5266 SBM View MSA
124246927 5268 Malvidae View MSA
124050935 5270 Rosid View MSA
123619943 5271 Pentapetalae View MSA
122796614 5272 Eudicot View MSA
122044212 5273 Angiosperm View MSA
121345851 5274 Embryophyte View MSA
123426500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain