Gene : Thecc1EG005288 T. cacao v1.1
Defline:  (1 of 1) PTHR11972//PTHR11972:SF41 - NADPH OXIDASE // FERRIC REDUCTION OXIDASE 2-RELATED Genomic Order:  3525
Name:  ? Thecc1EG005288 Secondary Identifier:  ? PAC:27437277
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5934 Theobroma cacao pathologic  
Tcacao PWY-6854 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005288 0.5kb upstream 0.5kb upstream 5747 true scaffold_1: 35936502-35942248 Theobroma cacao
Thecc1EG005288 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35936502-35937001 Theobroma cacao
Thecc1EG005288 0.5kb downstream 0.5kb downstream 5747 true scaffold_1: 35937002-35942748 Theobroma cacao
Thecc1EG005288 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35942249-35942748 Theobroma cacao
Thecc1EG005288 1.0kb upstream 1.0kb upstream 6247 true scaffold_1: 35936002-35942248 Theobroma cacao
Thecc1EG005288 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35936002-35937001 Theobroma cacao
Thecc1EG005288 1.0kb downstream 1.0kb downstream 6247 true scaffold_1: 35937002-35943248 Theobroma cacao
Thecc1EG005288 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35942249-35943248 Theobroma cacao
Thecc1EG005288 2.0kb upstream 2.0kb upstream 7247 true scaffold_1: 35935002-35942248 Theobroma cacao
Thecc1EG005288 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35935002-35937001 Theobroma cacao
Thecc1EG005288 2.0kb downstream 2.0kb downstream 7247 true scaffold_1: 35937002-35944248 Theobroma cacao
Thecc1EG005288 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35942249-35944248 Theobroma cacao
Thecc1EG005288 5.0kb upstream 5.0kb upstream 10247 true scaffold_1: 35932002-35942248 Theobroma cacao
Thecc1EG005288 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35932002-35937001 Theobroma cacao
Thecc1EG005288 5.0kb downstream 5.0kb downstream 10247 true scaffold_1: 35937002-35947248 Theobroma cacao
Thecc1EG005288 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35942249-35947248 Theobroma cacao
Thecc1EG005288 10.0kb upstream 10.0kb upstream 15247 true scaffold_1: 35927002-35942248 Theobroma cacao
Thecc1EG005288 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35927002-35937001 Theobroma cacao
Thecc1EG005288 10.0kb downstream 10.0kb downstream 15247 true scaffold_1: 35937002-35952248 Theobroma cacao
Thecc1EG005288 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35942249-35952248 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827369 5264 Brassicales-Malvales View MSA
124337486 5266 SBM View MSA
124250584 5268 Malvidae View MSA
124071281 5270 Rosid View MSA
123746738 5271 Pentapetalae View MSA
122787767 5272 Eudicot View MSA
122051677 5273 Angiosperm View MSA
121345980 5274 Embryophyte View MSA
123428579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain