Gene : Thecc1EG005274 T. cacao v1.1
Defline:  (1 of 1) PTHR12358//PTHR12358:SF43 - SPHINGOSINE KINASE // SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  3511
Name:  ? Thecc1EG005274 Secondary Identifier:  ? PAC:27431891
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7039 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005274 0.5kb upstream 0.5kb upstream 6126 true scaffold_1: 35874262-35880387 Theobroma cacao
Thecc1EG005274 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35874262-35874761 Theobroma cacao
Thecc1EG005274 0.5kb downstream 0.5kb downstream 6126 true scaffold_1: 35874762-35880887 Theobroma cacao
Thecc1EG005274 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35880388-35880887 Theobroma cacao
Thecc1EG005274 1.0kb upstream 1.0kb upstream 6626 true scaffold_1: 35873762-35880387 Theobroma cacao
Thecc1EG005274 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35873762-35874761 Theobroma cacao
Thecc1EG005274 1.0kb downstream 1.0kb downstream 6626 true scaffold_1: 35874762-35881387 Theobroma cacao
Thecc1EG005274 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35880388-35881387 Theobroma cacao
Thecc1EG005274 2.0kb upstream 2.0kb upstream 7626 true scaffold_1: 35872762-35880387 Theobroma cacao
Thecc1EG005274 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35872762-35874761 Theobroma cacao
Thecc1EG005274 2.0kb downstream 2.0kb downstream 7626 true scaffold_1: 35874762-35882387 Theobroma cacao
Thecc1EG005274 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35880388-35882387 Theobroma cacao
Thecc1EG005274 5.0kb upstream 5.0kb upstream 10626 true scaffold_1: 35869762-35880387 Theobroma cacao
Thecc1EG005274 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35869762-35874761 Theobroma cacao
Thecc1EG005274 5.0kb downstream 5.0kb downstream 10626 true scaffold_1: 35874762-35885387 Theobroma cacao
Thecc1EG005274 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35880388-35885387 Theobroma cacao
Thecc1EG005274 10.0kb upstream 10.0kb upstream 15626 true scaffold_1: 35864762-35880387 Theobroma cacao
Thecc1EG005274 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35864762-35874761 Theobroma cacao
Thecc1EG005274 10.0kb downstream 10.0kb downstream 15626 true scaffold_1: 35874762-35890387 Theobroma cacao
Thecc1EG005274 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35880388-35890387 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830792 5264 Brassicales-Malvales View MSA
124343149 5266 SBM View MSA
124237255 5268 Malvidae View MSA
124062992 5270 Rosid View MSA
123747106 5271 Pentapetalae View MSA
122789016 5272 Eudicot View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain