Gene : Thecc1EG005255 T. cacao v1.1

Defline:  (1 of 1) PTHR31459:SF3 - DESICCATION-RELATED PROTEIN LEA14-RELATED Genomic Order:  3492
Name:  ? Thecc1EG005255 Secondary Identifier:  ? PAC:27432045

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005255 0.5kb upstream 0.5kb upstream 2704 true scaffold_1: 35777984-35780687 Theobroma cacao
Thecc1EG005255 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35780188-35780687 Theobroma cacao
Thecc1EG005255 0.5kb downstream 0.5kb downstream 2704 true scaffold_1: 35777484-35780187 Theobroma cacao
Thecc1EG005255 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35777484-35777983 Theobroma cacao
Thecc1EG005255 1.0kb upstream 1.0kb upstream 3204 true scaffold_1: 35777984-35781187 Theobroma cacao
Thecc1EG005255 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35780188-35781187 Theobroma cacao
Thecc1EG005255 1.0kb downstream 1.0kb downstream 3204 true scaffold_1: 35776984-35780187 Theobroma cacao
Thecc1EG005255 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35776984-35777983 Theobroma cacao
Thecc1EG005255 2.0kb upstream 2.0kb upstream 4204 true scaffold_1: 35777984-35782187 Theobroma cacao
Thecc1EG005255 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35780188-35782187 Theobroma cacao
Thecc1EG005255 2.0kb downstream 2.0kb downstream 4204 true scaffold_1: 35775984-35780187 Theobroma cacao
Thecc1EG005255 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35775984-35777983 Theobroma cacao
Thecc1EG005255 5.0kb upstream 5.0kb upstream 7204 true scaffold_1: 35777984-35785187 Theobroma cacao
Thecc1EG005255 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35780188-35785187 Theobroma cacao
Thecc1EG005255 5.0kb downstream 5.0kb downstream 7204 true scaffold_1: 35772984-35780187 Theobroma cacao
Thecc1EG005255 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35772984-35777983 Theobroma cacao
Thecc1EG005255 10.0kb upstream 10.0kb upstream 12204 true scaffold_1: 35777984-35790187 Theobroma cacao
Thecc1EG005255 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35780188-35790187 Theobroma cacao
Thecc1EG005255 10.0kb downstream 10.0kb downstream 12204 true scaffold_1: 35767984-35780187 Theobroma cacao
Thecc1EG005255 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35767984-35777983 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836622 5264 Brassicales-Malvales View MSA
124346787 5266 SBM View MSA
124253995 5268 Malvidae View MSA
124063327 5270 Rosid View MSA
123749565 5271 Pentapetalae View MSA
122795600 5272 Eudicot View MSA
122043658 5273 Angiosperm View MSA
121348077 5274 Embryophyte View MSA
123380721 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain