Gene : Thecc1EG005199 T. cacao v1.1
Defline:  (1 of 1) K10389 - tubulin gamma (TUBG) Genomic Order:  3446
Name:  ? Thecc1EG005199 Secondary Identifier:  ? PAC:27436160
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5695 Theobroma cacao pathologic  
Tcacao PWY-6608 Theobroma cacao pathologic  
Tcacao PWY-6609 Theobroma cacao pathologic  
Tcacao PWY-7179 Theobroma cacao pathologic  
Tcacao SALVADEHYPOX-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005199 0.5kb upstream 0.5kb upstream 8642 true scaffold_1: 35557434-35566075 Theobroma cacao
Thecc1EG005199 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35557434-35557933 Theobroma cacao
Thecc1EG005199 0.5kb downstream 0.5kb downstream 8642 true scaffold_1: 35557934-35566575 Theobroma cacao
Thecc1EG005199 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35566076-35566575 Theobroma cacao
Thecc1EG005199 1.0kb upstream 1.0kb upstream 9142 true scaffold_1: 35556934-35566075 Theobroma cacao
Thecc1EG005199 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35556934-35557933 Theobroma cacao
Thecc1EG005199 1.0kb downstream 1.0kb downstream 9142 true scaffold_1: 35557934-35567075 Theobroma cacao
Thecc1EG005199 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35566076-35567075 Theobroma cacao
Thecc1EG005199 2.0kb upstream 2.0kb upstream 10142 true scaffold_1: 35555934-35566075 Theobroma cacao
Thecc1EG005199 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35555934-35557933 Theobroma cacao
Thecc1EG005199 2.0kb downstream 2.0kb downstream 10142 true scaffold_1: 35557934-35568075 Theobroma cacao
Thecc1EG005199 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35566076-35568075 Theobroma cacao
Thecc1EG005199 5.0kb upstream 5.0kb upstream 13142 true scaffold_1: 35552934-35566075 Theobroma cacao
Thecc1EG005199 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35552934-35557933 Theobroma cacao
Thecc1EG005199 5.0kb downstream 5.0kb downstream 13142 true scaffold_1: 35557934-35571075 Theobroma cacao
Thecc1EG005199 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35566076-35571075 Theobroma cacao
Thecc1EG005199 10.0kb upstream 10.0kb upstream 18142 true scaffold_1: 35547934-35566075 Theobroma cacao
Thecc1EG005199 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35547934-35557933 Theobroma cacao
Thecc1EG005199 10.0kb downstream 10.0kb downstream 18142 true scaffold_1: 35557934-35576075 Theobroma cacao
Thecc1EG005199 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35566076-35576075 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836063 5264 Brassicales-Malvales View MSA
124337609 5266 SBM View MSA
124248076 5268 Malvidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain