Gene : Thecc1EG005432 T. cacao v1.1
Defline:  (1 of 1) PTHR11081//PTHR11081:SF23 - XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY // FLAP ENDONUCLEASE GEN HOMOLOG 1 Genomic Order:  3652
Name:  ? Thecc1EG005432 Secondary Identifier:  ? PAC:27435877
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005432 0.5kb upstream 0.5kb upstream 7919 true scaffold_1: 36599744-36607662 Theobroma cacao
Thecc1EG005432 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36607163-36607662 Theobroma cacao
Thecc1EG005432 0.5kb downstream 0.5kb downstream 7919 true scaffold_1: 36599244-36607162 Theobroma cacao
Thecc1EG005432 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36599244-36599743 Theobroma cacao
Thecc1EG005432 1.0kb upstream 1.0kb upstream 8419 true scaffold_1: 36599744-36608162 Theobroma cacao
Thecc1EG005432 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36607163-36608162 Theobroma cacao
Thecc1EG005432 1.0kb downstream 1.0kb downstream 8419 true scaffold_1: 36598744-36607162 Theobroma cacao
Thecc1EG005432 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36598744-36599743 Theobroma cacao
Thecc1EG005432 2.0kb upstream 2.0kb upstream 9419 true scaffold_1: 36599744-36609162 Theobroma cacao
Thecc1EG005432 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36607163-36609162 Theobroma cacao
Thecc1EG005432 2.0kb downstream 2.0kb downstream 9419 true scaffold_1: 36597744-36607162 Theobroma cacao
Thecc1EG005432 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36597744-36599743 Theobroma cacao
Thecc1EG005432 5.0kb upstream 5.0kb upstream 12419 true scaffold_1: 36599744-36612162 Theobroma cacao
Thecc1EG005432 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36607163-36612162 Theobroma cacao
Thecc1EG005432 5.0kb downstream 5.0kb downstream 12419 true scaffold_1: 36594744-36607162 Theobroma cacao
Thecc1EG005432 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36594744-36599743 Theobroma cacao
Thecc1EG005432 10.0kb upstream 10.0kb upstream 17419 true scaffold_1: 36599744-36617162 Theobroma cacao
Thecc1EG005432 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36607163-36617162 Theobroma cacao
Thecc1EG005432 10.0kb downstream 10.0kb downstream 17419 true scaffold_1: 36589744-36607162 Theobroma cacao
Thecc1EG005432 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36589744-36599743 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828180 5264 Brassicales-Malvales View MSA
124342589 5266 SBM View MSA
124240120 5268 Malvidae View MSA
124071440 5270 Rosid View MSA
123738836 5271 Pentapetalae View MSA
122786263 5272 Eudicot View MSA
122047356 5273 Angiosperm View MSA
121351404 5274 Embryophyte View MSA
123425829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain