Gene : Thecc1EG005414 T. cacao v1.1
Defline:  (1 of 1) K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Genomic Order:  3634
Name:  ? Thecc1EG005414 Secondary Identifier:  ? PAC:27432633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005414 0.5kb upstream 0.5kb upstream 6172 true scaffold_1: 36508933-36515104 Theobroma cacao
Thecc1EG005414 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36514605-36515104 Theobroma cacao
Thecc1EG005414 0.5kb downstream 0.5kb downstream 6172 true scaffold_1: 36508433-36514604 Theobroma cacao
Thecc1EG005414 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36508433-36508932 Theobroma cacao
Thecc1EG005414 1.0kb upstream 1.0kb upstream 6672 true scaffold_1: 36508933-36515604 Theobroma cacao
Thecc1EG005414 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36514605-36515604 Theobroma cacao
Thecc1EG005414 1.0kb downstream 1.0kb downstream 6672 true scaffold_1: 36507933-36514604 Theobroma cacao
Thecc1EG005414 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36507933-36508932 Theobroma cacao
Thecc1EG005414 2.0kb upstream 2.0kb upstream 7672 true scaffold_1: 36508933-36516604 Theobroma cacao
Thecc1EG005414 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36514605-36516604 Theobroma cacao
Thecc1EG005414 2.0kb downstream 2.0kb downstream 7672 true scaffold_1: 36506933-36514604 Theobroma cacao
Thecc1EG005414 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36506933-36508932 Theobroma cacao
Thecc1EG005414 5.0kb upstream 5.0kb upstream 10672 true scaffold_1: 36508933-36519604 Theobroma cacao
Thecc1EG005414 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36514605-36519604 Theobroma cacao
Thecc1EG005414 5.0kb downstream 5.0kb downstream 10672 true scaffold_1: 36503933-36514604 Theobroma cacao
Thecc1EG005414 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36503933-36508932 Theobroma cacao
Thecc1EG005414 10.0kb upstream 10.0kb upstream 15672 true scaffold_1: 36508933-36524604 Theobroma cacao
Thecc1EG005414 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36514605-36524604 Theobroma cacao
Thecc1EG005414 10.0kb downstream 10.0kb downstream 15672 true scaffold_1: 36498933-36514604 Theobroma cacao
Thecc1EG005414 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36498933-36508932 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829328 5264 Brassicales-Malvales View MSA
124340889 5266 SBM View MSA
124244381 5268 Malvidae View MSA
124062748 5270 Rosid View MSA
123740454 5271 Pentapetalae View MSA
122790295 5272 Eudicot View MSA
122047675 5273 Angiosperm View MSA
121344985 5274 Embryophyte View MSA
123424538 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain