Gene : Thecc1EG005368 T. cacao v1.1

Defline:  (1 of 5) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase Genomic Order:  3593
Name:  ? Thecc1EG005368 Secondary Identifier:  ? PAC:27432083

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005368 0.5kb upstream 0.5kb upstream 3693 true scaffold_1: 36322470-36326162 Theobroma cacao
Thecc1EG005368 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36325663-36326162 Theobroma cacao
Thecc1EG005368 0.5kb downstream 0.5kb downstream 3693 true scaffold_1: 36321970-36325662 Theobroma cacao
Thecc1EG005368 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36321970-36322469 Theobroma cacao
Thecc1EG005368 1.0kb upstream 1.0kb upstream 4193 true scaffold_1: 36322470-36326662 Theobroma cacao
Thecc1EG005368 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36325663-36326662 Theobroma cacao
Thecc1EG005368 1.0kb downstream 1.0kb downstream 4193 true scaffold_1: 36321470-36325662 Theobroma cacao
Thecc1EG005368 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36321470-36322469 Theobroma cacao
Thecc1EG005368 2.0kb upstream 2.0kb upstream 5193 true scaffold_1: 36322470-36327662 Theobroma cacao
Thecc1EG005368 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36325663-36327662 Theobroma cacao
Thecc1EG005368 2.0kb downstream 2.0kb downstream 5193 true scaffold_1: 36320470-36325662 Theobroma cacao
Thecc1EG005368 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36320470-36322469 Theobroma cacao
Thecc1EG005368 5.0kb upstream 5.0kb upstream 8193 true scaffold_1: 36322470-36330662 Theobroma cacao
Thecc1EG005368 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36325663-36330662 Theobroma cacao
Thecc1EG005368 5.0kb downstream 5.0kb downstream 8193 true scaffold_1: 36317470-36325662 Theobroma cacao
Thecc1EG005368 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36317470-36322469 Theobroma cacao
Thecc1EG005368 10.0kb upstream 10.0kb upstream 13193 true scaffold_1: 36322470-36335662 Theobroma cacao
Thecc1EG005368 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36325663-36335662 Theobroma cacao
Thecc1EG005368 10.0kb downstream 10.0kb downstream 13193 true scaffold_1: 36312470-36325662 Theobroma cacao
Thecc1EG005368 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36312470-36322469 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833899 5264 Brassicales-Malvales View MSA
124336580 5266 SBM View MSA
124254621 5268 Malvidae View MSA
124070234 5270 Rosid View MSA
123741378 5271 Pentapetalae View MSA
122770039 5272 Eudicot View MSA
122044328 5273 Angiosperm View MSA
121310279 5274 Embryophyte View MSA
123428833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain