Gene : Thecc1EG005541 T. cacao v1.1
Defline:  (1 of 1) PTHR10804:SF13 - METHIONINE AMINOPEPTIDASE 1 Genomic Order:  3753
Name:  ? Thecc1EG005541 Secondary Identifier:  ? PAC:27437472
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005541 0.5kb upstream 0.5kb upstream 6161 true scaffold_1: 37134121-37140281 Theobroma cacao
Thecc1EG005541 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37139782-37140281 Theobroma cacao
Thecc1EG005541 0.5kb downstream 0.5kb downstream 6161 true scaffold_1: 37133621-37139781 Theobroma cacao
Thecc1EG005541 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37133621-37134120 Theobroma cacao
Thecc1EG005541 1.0kb upstream 1.0kb upstream 6661 true scaffold_1: 37134121-37140781 Theobroma cacao
Thecc1EG005541 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37139782-37140781 Theobroma cacao
Thecc1EG005541 1.0kb downstream 1.0kb downstream 6661 true scaffold_1: 37133121-37139781 Theobroma cacao
Thecc1EG005541 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37133121-37134120 Theobroma cacao
Thecc1EG005541 2.0kb upstream 2.0kb upstream 7661 true scaffold_1: 37134121-37141781 Theobroma cacao
Thecc1EG005541 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37139782-37141781 Theobroma cacao
Thecc1EG005541 2.0kb downstream 2.0kb downstream 7661 true scaffold_1: 37132121-37139781 Theobroma cacao
Thecc1EG005541 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37132121-37134120 Theobroma cacao
Thecc1EG005541 5.0kb upstream 5.0kb upstream 10661 true scaffold_1: 37134121-37144781 Theobroma cacao
Thecc1EG005541 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37139782-37144781 Theobroma cacao
Thecc1EG005541 5.0kb downstream 5.0kb downstream 10661 true scaffold_1: 37129121-37139781 Theobroma cacao
Thecc1EG005541 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37129121-37134120 Theobroma cacao
Thecc1EG005541 10.0kb upstream 10.0kb upstream 15661 true scaffold_1: 37134121-37149781 Theobroma cacao
Thecc1EG005541 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37139782-37149781 Theobroma cacao
Thecc1EG005541 10.0kb downstream 10.0kb downstream 15661 true scaffold_1: 37124121-37139781 Theobroma cacao
Thecc1EG005541 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37124121-37134120 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026230 5273 Angiosperm View MSA
123833138 5264 Brassicales-Malvales View MSA
124340836 5266 SBM View MSA
124239739 5268 Malvidae View MSA
124062332 5270 Rosid View MSA
123740512 5271 Pentapetalae View MSA
122787806 5272 Eudicot View MSA
123429177 5275 Viridiplantae View MSA
121350168 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain