Gene : Thecc1EG005554 T. cacao v1.1
Defline:  (1 of 15) PF04640 - PLATZ transcription factor (PLATZ) Genomic Order:  3765
Name:  ? Thecc1EG005554 Secondary Identifier:  ? PAC:27437212
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005554 0.5kb upstream 0.5kb upstream 2285 true scaffold_1: 37197406-37199690 Theobroma cacao
Thecc1EG005554 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37197406-37197905 Theobroma cacao
Thecc1EG005554 0.5kb downstream 0.5kb downstream 2285 true scaffold_1: 37197906-37200190 Theobroma cacao
Thecc1EG005554 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37199691-37200190 Theobroma cacao
Thecc1EG005554 1.0kb upstream 1.0kb upstream 2785 true scaffold_1: 37196906-37199690 Theobroma cacao
Thecc1EG005554 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37196906-37197905 Theobroma cacao
Thecc1EG005554 1.0kb downstream 1.0kb downstream 2785 true scaffold_1: 37197906-37200690 Theobroma cacao
Thecc1EG005554 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37199691-37200690 Theobroma cacao
Thecc1EG005554 2.0kb upstream 2.0kb upstream 3785 true scaffold_1: 37195906-37199690 Theobroma cacao
Thecc1EG005554 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37195906-37197905 Theobroma cacao
Thecc1EG005554 2.0kb downstream 2.0kb downstream 3785 true scaffold_1: 37197906-37201690 Theobroma cacao
Thecc1EG005554 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37199691-37201690 Theobroma cacao
Thecc1EG005554 5.0kb upstream 5.0kb upstream 6785 true scaffold_1: 37192906-37199690 Theobroma cacao
Thecc1EG005554 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37192906-37197905 Theobroma cacao
Thecc1EG005554 5.0kb downstream 5.0kb downstream 6785 true scaffold_1: 37197906-37204690 Theobroma cacao
Thecc1EG005554 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37199691-37204690 Theobroma cacao
Thecc1EG005554 10.0kb upstream 10.0kb upstream 11785 true scaffold_1: 37187906-37199690 Theobroma cacao
Thecc1EG005554 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37187906-37197905 Theobroma cacao
Thecc1EG005554 10.0kb downstream 10.0kb downstream 11785 true scaffold_1: 37197906-37209690 Theobroma cacao
Thecc1EG005554 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37199691-37209690 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835234 5264 Brassicales-Malvales View MSA
124343314 5266 SBM View MSA
124253522 5268 Malvidae View MSA
124069177 5270 Rosid View MSA
123750215 5271 Pentapetalae View MSA
122789413 5272 Eudicot View MSA
122043598 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain