Gene : Thecc1EG005506 T. cacao v1.1
Defline:  (1 of 2) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  3720
Name:  ? Thecc1EG005506 Secondary Identifier:  ? PAC:27436674
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005506 0.5kb upstream 0.5kb upstream 3965 true scaffold_1: 36986379-36990343 Theobroma cacao
Thecc1EG005506 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36989844-36990343 Theobroma cacao
Thecc1EG005506 0.5kb downstream 0.5kb downstream 3965 true scaffold_1: 36985879-36989843 Theobroma cacao
Thecc1EG005506 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36985879-36986378 Theobroma cacao
Thecc1EG005506 1.0kb upstream 1.0kb upstream 4465 true scaffold_1: 36986379-36990843 Theobroma cacao
Thecc1EG005506 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36989844-36990843 Theobroma cacao
Thecc1EG005506 1.0kb downstream 1.0kb downstream 4465 true scaffold_1: 36985379-36989843 Theobroma cacao
Thecc1EG005506 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36985379-36986378 Theobroma cacao
Thecc1EG005506 2.0kb upstream 2.0kb upstream 5465 true scaffold_1: 36986379-36991843 Theobroma cacao
Thecc1EG005506 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36989844-36991843 Theobroma cacao
Thecc1EG005506 2.0kb downstream 2.0kb downstream 5465 true scaffold_1: 36984379-36989843 Theobroma cacao
Thecc1EG005506 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36984379-36986378 Theobroma cacao
Thecc1EG005506 5.0kb upstream 5.0kb upstream 8465 true scaffold_1: 36986379-36994843 Theobroma cacao
Thecc1EG005506 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36989844-36994843 Theobroma cacao
Thecc1EG005506 5.0kb downstream 5.0kb downstream 8465 true scaffold_1: 36981379-36989843 Theobroma cacao
Thecc1EG005506 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36981379-36986378 Theobroma cacao
Thecc1EG005506 10.0kb upstream 10.0kb upstream 13465 true scaffold_1: 36986379-36999843 Theobroma cacao
Thecc1EG005506 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36989844-36999843 Theobroma cacao
Thecc1EG005506 10.0kb downstream 10.0kb downstream 13465 true scaffold_1: 36976379-36989843 Theobroma cacao
Thecc1EG005506 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36976379-36986378 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835843 5264 Brassicales-Malvales View MSA
124341582 5266 SBM View MSA
124248925 5268 Malvidae View MSA
124061423 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain