Gene : Thecc1EG005492 T. cacao v1.1
Defline:  (1 of 1) PTHR31100//PTHR31100:SF2 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 18-RELATED Genomic Order:  3709
Name:  ? Thecc1EG005492 Secondary Identifier:  ? PAC:27431903
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005492 0.5kb upstream 0.5kb upstream 3017 true scaffold_1: 36913011-36916027 Theobroma cacao
Thecc1EG005492 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36915528-36916027 Theobroma cacao
Thecc1EG005492 0.5kb downstream 0.5kb downstream 3017 true scaffold_1: 36912511-36915527 Theobroma cacao
Thecc1EG005492 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36912511-36913010 Theobroma cacao
Thecc1EG005492 1.0kb upstream 1.0kb upstream 3517 true scaffold_1: 36913011-36916527 Theobroma cacao
Thecc1EG005492 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36915528-36916527 Theobroma cacao
Thecc1EG005492 1.0kb downstream 1.0kb downstream 3517 true scaffold_1: 36912011-36915527 Theobroma cacao
Thecc1EG005492 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36912011-36913010 Theobroma cacao
Thecc1EG005492 2.0kb upstream 2.0kb upstream 4517 true scaffold_1: 36913011-36917527 Theobroma cacao
Thecc1EG005492 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36915528-36917527 Theobroma cacao
Thecc1EG005492 2.0kb downstream 2.0kb downstream 4517 true scaffold_1: 36911011-36915527 Theobroma cacao
Thecc1EG005492 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36911011-36913010 Theobroma cacao
Thecc1EG005492 5.0kb upstream 5.0kb upstream 7517 true scaffold_1: 36913011-36920527 Theobroma cacao
Thecc1EG005492 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36915528-36920527 Theobroma cacao
Thecc1EG005492 5.0kb downstream 5.0kb downstream 7517 true scaffold_1: 36908011-36915527 Theobroma cacao
Thecc1EG005492 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36908011-36913010 Theobroma cacao
Thecc1EG005492 10.0kb upstream 10.0kb upstream 12517 true scaffold_1: 36913011-36925527 Theobroma cacao
Thecc1EG005492 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36915528-36925527 Theobroma cacao
Thecc1EG005492 10.0kb downstream 10.0kb downstream 12517 true scaffold_1: 36903011-36915527 Theobroma cacao
Thecc1EG005492 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36903011-36913010 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834550 5264 Brassicales-Malvales View MSA
124336643 5266 SBM View MSA
124246711 5268 Malvidae View MSA
124066215 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain