Gene : Thecc1EG005749 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3933
Name:  ? Thecc1EG005749 Secondary Identifier:  ? PAC:27434973
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005749 0.5kb upstream 0.5kb upstream 4025 true scaffold_1: 38075281-38079305 Theobroma cacao
Thecc1EG005749 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38075281-38075780 Theobroma cacao
Thecc1EG005749 0.5kb downstream 0.5kb downstream 4025 true scaffold_1: 38075781-38079805 Theobroma cacao
Thecc1EG005749 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38079306-38079805 Theobroma cacao
Thecc1EG005749 1.0kb upstream 1.0kb upstream 4525 true scaffold_1: 38074781-38079305 Theobroma cacao
Thecc1EG005749 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38074781-38075780 Theobroma cacao
Thecc1EG005749 1.0kb downstream 1.0kb downstream 4525 true scaffold_1: 38075781-38080305 Theobroma cacao
Thecc1EG005749 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38079306-38080305 Theobroma cacao
Thecc1EG005749 2.0kb upstream 2.0kb upstream 5525 true scaffold_1: 38073781-38079305 Theobroma cacao
Thecc1EG005749 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38073781-38075780 Theobroma cacao
Thecc1EG005749 2.0kb downstream 2.0kb downstream 5525 true scaffold_1: 38075781-38081305 Theobroma cacao
Thecc1EG005749 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38079306-38081305 Theobroma cacao
Thecc1EG005749 5.0kb upstream 5.0kb upstream 8525 true scaffold_1: 38070781-38079305 Theobroma cacao
Thecc1EG005749 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38070781-38075780 Theobroma cacao
Thecc1EG005749 5.0kb downstream 5.0kb downstream 8525 true scaffold_1: 38075781-38084305 Theobroma cacao
Thecc1EG005749 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38079306-38084305 Theobroma cacao
Thecc1EG005749 10.0kb upstream 10.0kb upstream 13525 true scaffold_1: 38065781-38079305 Theobroma cacao
Thecc1EG005749 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38065781-38075780 Theobroma cacao
Thecc1EG005749 10.0kb downstream 10.0kb downstream 13525 true scaffold_1: 38075781-38089305 Theobroma cacao
Thecc1EG005749 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38079306-38089305 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832410 5264 Brassicales-Malvales View MSA
124343408 5266 SBM View MSA
124244943 5268 Malvidae View MSA
124062625 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain