Gene : Thecc1EG005676 T. cacao v1.1

Defline:  (1 of 61) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  3868
Name:  ? Thecc1EG005676 Secondary Identifier:  ? PAC:27436394

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005676 0.5kb upstream 0.5kb upstream 38342 true scaffold_1: 37755066-37793407 Theobroma cacao
Thecc1EG005676 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37792908-37793407 Theobroma cacao
Thecc1EG005676 0.5kb downstream 0.5kb downstream 38342 true scaffold_1: 37754566-37792907 Theobroma cacao
Thecc1EG005676 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37754566-37755065 Theobroma cacao
Thecc1EG005676 1.0kb upstream 1.0kb upstream 38842 true scaffold_1: 37755066-37793907 Theobroma cacao
Thecc1EG005676 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37792908-37793907 Theobroma cacao
Thecc1EG005676 1.0kb downstream 1.0kb downstream 38842 true scaffold_1: 37754066-37792907 Theobroma cacao
Thecc1EG005676 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37754066-37755065 Theobroma cacao
Thecc1EG005676 2.0kb upstream 2.0kb upstream 39842 true scaffold_1: 37755066-37794907 Theobroma cacao
Thecc1EG005676 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37792908-37794907 Theobroma cacao
Thecc1EG005676 2.0kb downstream 2.0kb downstream 39842 true scaffold_1: 37753066-37792907 Theobroma cacao
Thecc1EG005676 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37753066-37755065 Theobroma cacao
Thecc1EG005676 5.0kb upstream 5.0kb upstream 42842 true scaffold_1: 37755066-37797907 Theobroma cacao
Thecc1EG005676 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37792908-37797907 Theobroma cacao
Thecc1EG005676 5.0kb downstream 5.0kb downstream 42842 true scaffold_1: 37750066-37792907 Theobroma cacao
Thecc1EG005676 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37750066-37755065 Theobroma cacao
Thecc1EG005676 10.0kb upstream 10.0kb upstream 47842 true scaffold_1: 37755066-37802907 Theobroma cacao
Thecc1EG005676 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37792908-37802907 Theobroma cacao
Thecc1EG005676 10.0kb downstream 10.0kb downstream 47842 true scaffold_1: 37745066-37792907 Theobroma cacao
Thecc1EG005676 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37745066-37755065 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841041 5264 Brassicales-Malvales View MSA
124346247 5266 SBM View MSA
124252034 5268 Malvidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain