Gene : Thecc1EG005633 T. cacao v1.1
Defline:  (1 of 1) 1.13.11.71 - Carotenoid-9',10'-cleaving dioxygenase / Beta-carotene 9',10'-monooxygenase Genomic Order:  3831
Name:  ? Thecc1EG005633 Secondary Identifier:  ? PAC:27436564
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7101 Theobroma cacao pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005633 0.5kb upstream 0.5kb upstream 4574 true scaffold_1: 37558859-37563432 Theobroma cacao
Thecc1EG005633 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37562933-37563432 Theobroma cacao
Thecc1EG005633 0.5kb downstream 0.5kb downstream 4574 true scaffold_1: 37558359-37562932 Theobroma cacao
Thecc1EG005633 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37558359-37558858 Theobroma cacao
Thecc1EG005633 1.0kb upstream 1.0kb upstream 5074 true scaffold_1: 37558859-37563932 Theobroma cacao
Thecc1EG005633 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37562933-37563932 Theobroma cacao
Thecc1EG005633 1.0kb downstream 1.0kb downstream 5074 true scaffold_1: 37557859-37562932 Theobroma cacao
Thecc1EG005633 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37557859-37558858 Theobroma cacao
Thecc1EG005633 2.0kb upstream 2.0kb upstream 6074 true scaffold_1: 37558859-37564932 Theobroma cacao
Thecc1EG005633 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37562933-37564932 Theobroma cacao
Thecc1EG005633 2.0kb downstream 2.0kb downstream 6074 true scaffold_1: 37556859-37562932 Theobroma cacao
Thecc1EG005633 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37556859-37558858 Theobroma cacao
Thecc1EG005633 5.0kb upstream 5.0kb upstream 9074 true scaffold_1: 37558859-37567932 Theobroma cacao
Thecc1EG005633 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37562933-37567932 Theobroma cacao
Thecc1EG005633 5.0kb downstream 5.0kb downstream 9074 true scaffold_1: 37553859-37562932 Theobroma cacao
Thecc1EG005633 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37553859-37558858 Theobroma cacao
Thecc1EG005633 10.0kb upstream 10.0kb upstream 14074 true scaffold_1: 37558859-37572932 Theobroma cacao
Thecc1EG005633 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37562933-37572932 Theobroma cacao
Thecc1EG005633 10.0kb downstream 10.0kb downstream 14074 true scaffold_1: 37548859-37562932 Theobroma cacao
Thecc1EG005633 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37548859-37558858 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829529 5264 Brassicales-Malvales View MSA
124346337 5266 SBM View MSA
124240991 5268 Malvidae View MSA
124061510 5270 Rosid View MSA
123739443 5271 Pentapetalae View MSA
122788061 5272 Eudicot View MSA
122047914 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344181 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain