Gene : Thecc1EG005626 T. cacao v1.1
Defline:  (1 of 2) K00025 - malate dehydrogenase (MDH1) Genomic Order:  3825
Name:  ? Thecc1EG005626 Secondary Identifier:  ? PAC:27435551
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLUCONEO-PWY Theobroma cacao pathologic  
Tcacao GLYOXYLATE-BYPASS Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5690 Theobroma cacao pathologic  
Tcacao PWY66-399 Theobroma cacao pathologic  
Tcacao PWY-7115 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005626 0.5kb upstream 0.5kb upstream 3002 true scaffold_1: 37530480-37533481 Theobroma cacao
Thecc1EG005626 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37532982-37533481 Theobroma cacao
Thecc1EG005626 0.5kb downstream 0.5kb downstream 3002 true scaffold_1: 37529980-37532981 Theobroma cacao
Thecc1EG005626 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37529980-37530479 Theobroma cacao
Thecc1EG005626 1.0kb upstream 1.0kb upstream 3502 true scaffold_1: 37530480-37533981 Theobroma cacao
Thecc1EG005626 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37532982-37533981 Theobroma cacao
Thecc1EG005626 1.0kb downstream 1.0kb downstream 3502 true scaffold_1: 37529480-37532981 Theobroma cacao
Thecc1EG005626 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37529480-37530479 Theobroma cacao
Thecc1EG005626 2.0kb upstream 2.0kb upstream 4502 true scaffold_1: 37530480-37534981 Theobroma cacao
Thecc1EG005626 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37532982-37534981 Theobroma cacao
Thecc1EG005626 2.0kb downstream 2.0kb downstream 4502 true scaffold_1: 37528480-37532981 Theobroma cacao
Thecc1EG005626 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37528480-37530479 Theobroma cacao
Thecc1EG005626 5.0kb upstream 5.0kb upstream 7502 true scaffold_1: 37530480-37537981 Theobroma cacao
Thecc1EG005626 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37532982-37537981 Theobroma cacao
Thecc1EG005626 5.0kb downstream 5.0kb downstream 7502 true scaffold_1: 37525480-37532981 Theobroma cacao
Thecc1EG005626 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37525480-37530479 Theobroma cacao
Thecc1EG005626 10.0kb upstream 10.0kb upstream 12502 true scaffold_1: 37530480-37542981 Theobroma cacao
Thecc1EG005626 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37532982-37542981 Theobroma cacao
Thecc1EG005626 10.0kb downstream 10.0kb downstream 12502 true scaffold_1: 37520480-37532981 Theobroma cacao
Thecc1EG005626 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37520480-37530479 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830714 5264 Brassicales-Malvales View MSA
124349239 5266 SBM View MSA
124248989 5268 Malvidae View MSA
124071542 5270 Rosid View MSA
123746984 5271 Pentapetalae View MSA
122786587 5272 Eudicot View MSA
122050336 5273 Angiosperm View MSA
121345674 5274 Embryophyte View MSA
123426378 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain