Gene : Thecc1EG005925 T. cacao v1.1
Defline:  (1 of 103) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  4091
Name:  ? Thecc1EG005925 Secondary Identifier:  ? PAC:27432170
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005925 0.5kb upstream 0.5kb upstream 3825 true scaffold_1: 38820503-38824327 Theobroma cacao
Thecc1EG005925 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38820503-38821002 Theobroma cacao
Thecc1EG005925 0.5kb downstream 0.5kb downstream 3825 true scaffold_1: 38821003-38824827 Theobroma cacao
Thecc1EG005925 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38824328-38824827 Theobroma cacao
Thecc1EG005925 1.0kb upstream 1.0kb upstream 4325 true scaffold_1: 38820003-38824327 Theobroma cacao
Thecc1EG005925 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38820003-38821002 Theobroma cacao
Thecc1EG005925 1.0kb downstream 1.0kb downstream 4325 true scaffold_1: 38821003-38825327 Theobroma cacao
Thecc1EG005925 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38824328-38825327 Theobroma cacao
Thecc1EG005925 2.0kb upstream 2.0kb upstream 5325 true scaffold_1: 38819003-38824327 Theobroma cacao
Thecc1EG005925 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38819003-38821002 Theobroma cacao
Thecc1EG005925 2.0kb downstream 2.0kb downstream 5325 true scaffold_1: 38821003-38826327 Theobroma cacao
Thecc1EG005925 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38824328-38826327 Theobroma cacao
Thecc1EG005925 5.0kb upstream 5.0kb upstream 8325 true scaffold_1: 38816003-38824327 Theobroma cacao
Thecc1EG005925 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38816003-38821002 Theobroma cacao
Thecc1EG005925 5.0kb downstream 5.0kb downstream 8325 true scaffold_1: 38821003-38829327 Theobroma cacao
Thecc1EG005925 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38824328-38829327 Theobroma cacao
Thecc1EG005925 10.0kb upstream 10.0kb upstream 13325 true scaffold_1: 38811003-38824327 Theobroma cacao
Thecc1EG005925 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38811003-38821002 Theobroma cacao
Thecc1EG005925 10.0kb downstream 10.0kb downstream 13325 true scaffold_1: 38821003-38834327 Theobroma cacao
Thecc1EG005925 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38824328-38834327 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824197 5264 Brassicales-Malvales View MSA
124349521 5266 SBM View MSA
124252868 5268 Malvidae View MSA
124073794 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain