Gene : Thecc1EG005888 T. cacao v1.1
Defline:  Uncharacterized protein (58%P) Genomic Order:  4060
Name:  ? Thecc1EG005888 Secondary Identifier:  ? PAC:27432818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005888 0.5kb upstream 0.5kb upstream 3178 true scaffold_1: 38688615-38691792 Theobroma cacao
Thecc1EG005888 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38691293-38691792 Theobroma cacao
Thecc1EG005888 0.5kb downstream 0.5kb downstream 3178 true scaffold_1: 38688115-38691292 Theobroma cacao
Thecc1EG005888 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38688115-38688614 Theobroma cacao
Thecc1EG005888 1.0kb upstream 1.0kb upstream 3678 true scaffold_1: 38688615-38692292 Theobroma cacao
Thecc1EG005888 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38691293-38692292 Theobroma cacao
Thecc1EG005888 1.0kb downstream 1.0kb downstream 3678 true scaffold_1: 38687615-38691292 Theobroma cacao
Thecc1EG005888 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38687615-38688614 Theobroma cacao
Thecc1EG005888 2.0kb upstream 2.0kb upstream 4678 true scaffold_1: 38688615-38693292 Theobroma cacao
Thecc1EG005888 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38691293-38693292 Theobroma cacao
Thecc1EG005888 2.0kb downstream 2.0kb downstream 4678 true scaffold_1: 38686615-38691292 Theobroma cacao
Thecc1EG005888 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38686615-38688614 Theobroma cacao
Thecc1EG005888 5.0kb upstream 5.0kb upstream 7678 true scaffold_1: 38688615-38696292 Theobroma cacao
Thecc1EG005888 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38691293-38696292 Theobroma cacao
Thecc1EG005888 5.0kb downstream 5.0kb downstream 7678 true scaffold_1: 38683615-38691292 Theobroma cacao
Thecc1EG005888 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38683615-38688614 Theobroma cacao
Thecc1EG005888 10.0kb upstream 10.0kb upstream 12678 true scaffold_1: 38688615-38701292 Theobroma cacao
Thecc1EG005888 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38691293-38701292 Theobroma cacao
Thecc1EG005888 10.0kb downstream 10.0kb downstream 12678 true scaffold_1: 38678615-38691292 Theobroma cacao
Thecc1EG005888 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38678615-38688614 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838868 5264 Brassicales-Malvales View MSA
124339911 5266 SBM View MSA
124237529 5268 Malvidae View MSA
124065228 5270 Rosid View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain