Gene : Thecc1EG005879 T. cacao v1.1
Defline:  (1 of 1) PTHR13301//PTHR13301:SF61 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  4053
Name:  ? Thecc1EG005879 Secondary Identifier:  ? PAC:27435217
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1001 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005879 0.5kb upstream 0.5kb upstream 10304 true scaffold_1: 38641456-38651759 Theobroma cacao
Thecc1EG005879 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38641456-38641955 Theobroma cacao
Thecc1EG005879 0.5kb downstream 0.5kb downstream 10304 true scaffold_1: 38641956-38652259 Theobroma cacao
Thecc1EG005879 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38651760-38652259 Theobroma cacao
Thecc1EG005879 1.0kb upstream 1.0kb upstream 10804 true scaffold_1: 38640956-38651759 Theobroma cacao
Thecc1EG005879 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38640956-38641955 Theobroma cacao
Thecc1EG005879 1.0kb downstream 1.0kb downstream 10804 true scaffold_1: 38641956-38652759 Theobroma cacao
Thecc1EG005879 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38651760-38652759 Theobroma cacao
Thecc1EG005879 2.0kb upstream 2.0kb upstream 11804 true scaffold_1: 38639956-38651759 Theobroma cacao
Thecc1EG005879 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38639956-38641955 Theobroma cacao
Thecc1EG005879 2.0kb downstream 2.0kb downstream 11804 true scaffold_1: 38641956-38653759 Theobroma cacao
Thecc1EG005879 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38651760-38653759 Theobroma cacao
Thecc1EG005879 5.0kb upstream 5.0kb upstream 14804 true scaffold_1: 38636956-38651759 Theobroma cacao
Thecc1EG005879 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38636956-38641955 Theobroma cacao
Thecc1EG005879 5.0kb downstream 5.0kb downstream 14804 true scaffold_1: 38641956-38656759 Theobroma cacao
Thecc1EG005879 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38651760-38656759 Theobroma cacao
Thecc1EG005879 10.0kb upstream 10.0kb upstream 19804 true scaffold_1: 38631956-38651759 Theobroma cacao
Thecc1EG005879 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38631956-38641955 Theobroma cacao
Thecc1EG005879 10.0kb downstream 10.0kb downstream 19804 true scaffold_1: 38641956-38661759 Theobroma cacao
Thecc1EG005879 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38651760-38661759 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829715 5264 Brassicales-Malvales View MSA
124350218 5266 SBM View MSA
124240162 5268 Malvidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain