Gene : Thecc1EG005865 T. cacao v1.1
Defline:  (1 of 1) KOG4443 - Putative transcription factor HALR/MLL3, involved in embryonic development Genomic Order:  4040
Name:  ? Thecc1EG005865 Secondary Identifier:  ? PAC:27435555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005865 0.5kb upstream 0.5kb upstream 7135 true scaffold_1: 38584187-38591321 Theobroma cacao
Thecc1EG005865 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38584187-38584686 Theobroma cacao
Thecc1EG005865 0.5kb downstream 0.5kb downstream 7135 true scaffold_1: 38584687-38591821 Theobroma cacao
Thecc1EG005865 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38591322-38591821 Theobroma cacao
Thecc1EG005865 1.0kb upstream 1.0kb upstream 7635 true scaffold_1: 38583687-38591321 Theobroma cacao
Thecc1EG005865 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38583687-38584686 Theobroma cacao
Thecc1EG005865 1.0kb downstream 1.0kb downstream 7635 true scaffold_1: 38584687-38592321 Theobroma cacao
Thecc1EG005865 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38591322-38592321 Theobroma cacao
Thecc1EG005865 2.0kb upstream 2.0kb upstream 8635 true scaffold_1: 38582687-38591321 Theobroma cacao
Thecc1EG005865 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38582687-38584686 Theobroma cacao
Thecc1EG005865 2.0kb downstream 2.0kb downstream 8635 true scaffold_1: 38584687-38593321 Theobroma cacao
Thecc1EG005865 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38591322-38593321 Theobroma cacao
Thecc1EG005865 5.0kb upstream 5.0kb upstream 11635 true scaffold_1: 38579687-38591321 Theobroma cacao
Thecc1EG005865 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38579687-38584686 Theobroma cacao
Thecc1EG005865 5.0kb downstream 5.0kb downstream 11635 true scaffold_1: 38584687-38596321 Theobroma cacao
Thecc1EG005865 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38591322-38596321 Theobroma cacao
Thecc1EG005865 10.0kb upstream 10.0kb upstream 16635 true scaffold_1: 38574687-38591321 Theobroma cacao
Thecc1EG005865 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38574687-38584686 Theobroma cacao
Thecc1EG005865 10.0kb downstream 10.0kb downstream 16635 true scaffold_1: 38584687-38601321 Theobroma cacao
Thecc1EG005865 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38591322-38601321 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841719 5264 Brassicales-Malvales View MSA
124340017 5266 SBM View MSA
124243791 5268 Malvidae View MSA
124064827 5270 Rosid View MSA
123748357 5271 Pentapetalae View MSA
122789361 5272 Eudicot View MSA
122043559 5273 Angiosperm View MSA
121347364 5274 Embryophyte View MSA
123380534 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain