Gene : Thecc1EG005841 T. cacao v1.1
Defline:  (1 of 1) K02863 - large subunit ribosomal protein L1 (RP-L1, MRPL1, rplA) Genomic Order:  4016
Name:  ? Thecc1EG005841 Secondary Identifier:  ? PAC:27432721
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005841 0.5kb upstream 0.5kb upstream 4211 true scaffold_1: 38451403-38455613 Theobroma cacao
Thecc1EG005841 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38451403-38451902 Theobroma cacao
Thecc1EG005841 0.5kb downstream 0.5kb downstream 4211 true scaffold_1: 38451903-38456113 Theobroma cacao
Thecc1EG005841 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38455614-38456113 Theobroma cacao
Thecc1EG005841 1.0kb upstream 1.0kb upstream 4711 true scaffold_1: 38450903-38455613 Theobroma cacao
Thecc1EG005841 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38450903-38451902 Theobroma cacao
Thecc1EG005841 1.0kb downstream 1.0kb downstream 4711 true scaffold_1: 38451903-38456613 Theobroma cacao
Thecc1EG005841 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38455614-38456613 Theobroma cacao
Thecc1EG005841 2.0kb upstream 2.0kb upstream 5711 true scaffold_1: 38449903-38455613 Theobroma cacao
Thecc1EG005841 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38449903-38451902 Theobroma cacao
Thecc1EG005841 2.0kb downstream 2.0kb downstream 5711 true scaffold_1: 38451903-38457613 Theobroma cacao
Thecc1EG005841 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38455614-38457613 Theobroma cacao
Thecc1EG005841 5.0kb upstream 5.0kb upstream 8711 true scaffold_1: 38446903-38455613 Theobroma cacao
Thecc1EG005841 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38446903-38451902 Theobroma cacao
Thecc1EG005841 5.0kb downstream 5.0kb downstream 8711 true scaffold_1: 38451903-38460613 Theobroma cacao
Thecc1EG005841 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38455614-38460613 Theobroma cacao
Thecc1EG005841 10.0kb upstream 10.0kb upstream 13711 true scaffold_1: 38441903-38455613 Theobroma cacao
Thecc1EG005841 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38441903-38451902 Theobroma cacao
Thecc1EG005841 10.0kb downstream 10.0kb downstream 13711 true scaffold_1: 38451903-38465613 Theobroma cacao
Thecc1EG005841 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38455614-38465613 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833583 5264 Brassicales-Malvales View MSA
124339501 5266 SBM View MSA
124237610 5268 Malvidae View MSA
124061690 5270 Rosid View MSA
123738207 5271 Pentapetalae View MSA
122788620 5272 Eudicot View MSA
122046833 5273 Angiosperm View MSA
121346612 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain