Gene : Thecc1EG005843 T. cacao v1.1
Defline:  (1 of 4) PTHR10366//PTHR10366:SF332 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  4018
Name:  ? Thecc1EG005843 Secondary Identifier:  ? PAC:27433022
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005843 0.5kb upstream 0.5kb upstream 3261 true scaffold_1: 38461602-38464862 Theobroma cacao
Thecc1EG005843 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38461602-38462101 Theobroma cacao
Thecc1EG005843 0.5kb downstream 0.5kb downstream 3261 true scaffold_1: 38462102-38465362 Theobroma cacao
Thecc1EG005843 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38464863-38465362 Theobroma cacao
Thecc1EG005843 1.0kb upstream 1.0kb upstream 3761 true scaffold_1: 38461102-38464862 Theobroma cacao
Thecc1EG005843 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38461102-38462101 Theobroma cacao
Thecc1EG005843 1.0kb downstream 1.0kb downstream 3761 true scaffold_1: 38462102-38465862 Theobroma cacao
Thecc1EG005843 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38464863-38465862 Theobroma cacao
Thecc1EG005843 2.0kb upstream 2.0kb upstream 4761 true scaffold_1: 38460102-38464862 Theobroma cacao
Thecc1EG005843 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38460102-38462101 Theobroma cacao
Thecc1EG005843 2.0kb downstream 2.0kb downstream 4761 true scaffold_1: 38462102-38466862 Theobroma cacao
Thecc1EG005843 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38464863-38466862 Theobroma cacao
Thecc1EG005843 5.0kb upstream 5.0kb upstream 7761 true scaffold_1: 38457102-38464862 Theobroma cacao
Thecc1EG005843 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38457102-38462101 Theobroma cacao
Thecc1EG005843 5.0kb downstream 5.0kb downstream 7761 true scaffold_1: 38462102-38469862 Theobroma cacao
Thecc1EG005843 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38464863-38469862 Theobroma cacao
Thecc1EG005843 10.0kb upstream 10.0kb upstream 12761 true scaffold_1: 38452102-38464862 Theobroma cacao
Thecc1EG005843 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38452102-38462101 Theobroma cacao
Thecc1EG005843 10.0kb downstream 10.0kb downstream 12761 true scaffold_1: 38462102-38474862 Theobroma cacao
Thecc1EG005843 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38464863-38474862 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826657 5264 Brassicales-Malvales View MSA
124321130 5266 SBM View MSA
124253978 5268 Malvidae View MSA
124072658 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain