Gene : Thecc1EG005818 T. cacao v1.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF237 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3997
Name:  ? Thecc1EG005818 Secondary Identifier:  ? PAC:27433673
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005818 0.5kb upstream 0.5kb upstream 4979 true scaffold_1: 38362819-38367797 Theobroma cacao
Thecc1EG005818 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38362819-38363318 Theobroma cacao
Thecc1EG005818 0.5kb downstream 0.5kb downstream 4979 true scaffold_1: 38363319-38368297 Theobroma cacao
Thecc1EG005818 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38367798-38368297 Theobroma cacao
Thecc1EG005818 1.0kb upstream 1.0kb upstream 5479 true scaffold_1: 38362319-38367797 Theobroma cacao
Thecc1EG005818 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38362319-38363318 Theobroma cacao
Thecc1EG005818 1.0kb downstream 1.0kb downstream 5479 true scaffold_1: 38363319-38368797 Theobroma cacao
Thecc1EG005818 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38367798-38368797 Theobroma cacao
Thecc1EG005818 2.0kb upstream 2.0kb upstream 6479 true scaffold_1: 38361319-38367797 Theobroma cacao
Thecc1EG005818 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38361319-38363318 Theobroma cacao
Thecc1EG005818 2.0kb downstream 2.0kb downstream 6479 true scaffold_1: 38363319-38369797 Theobroma cacao
Thecc1EG005818 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38367798-38369797 Theobroma cacao
Thecc1EG005818 5.0kb upstream 5.0kb upstream 9479 true scaffold_1: 38358319-38367797 Theobroma cacao
Thecc1EG005818 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38358319-38363318 Theobroma cacao
Thecc1EG005818 5.0kb downstream 5.0kb downstream 9479 true scaffold_1: 38363319-38372797 Theobroma cacao
Thecc1EG005818 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38367798-38372797 Theobroma cacao
Thecc1EG005818 10.0kb upstream 10.0kb upstream 14479 true scaffold_1: 38353319-38367797 Theobroma cacao
Thecc1EG005818 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38353319-38363318 Theobroma cacao
Thecc1EG005818 10.0kb downstream 10.0kb downstream 14479 true scaffold_1: 38363319-38377797 Theobroma cacao
Thecc1EG005818 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38367798-38377797 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123815809 5264 Brassicales-Malvales Singleton cluster - no MSA
124312227 5266 SBM Singleton cluster - no MSA
124248714 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain