Gene : Thecc1EG005793 T. cacao v1.1
Defline:  (1 of 3) K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Genomic Order:  3972
Name:  ? Thecc1EG005793 Secondary Identifier:  ? PAC:27435234
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005793 0.5kb upstream 0.5kb upstream 3387 true scaffold_1: 38265183-38268569 Theobroma cacao
Thecc1EG005793 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38265183-38265682 Theobroma cacao
Thecc1EG005793 0.5kb downstream 0.5kb downstream 3387 true scaffold_1: 38265683-38269069 Theobroma cacao
Thecc1EG005793 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38268570-38269069 Theobroma cacao
Thecc1EG005793 1.0kb upstream 1.0kb upstream 3887 true scaffold_1: 38264683-38268569 Theobroma cacao
Thecc1EG005793 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38264683-38265682 Theobroma cacao
Thecc1EG005793 1.0kb downstream 1.0kb downstream 3887 true scaffold_1: 38265683-38269569 Theobroma cacao
Thecc1EG005793 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38268570-38269569 Theobroma cacao
Thecc1EG005793 2.0kb upstream 2.0kb upstream 4887 true scaffold_1: 38263683-38268569 Theobroma cacao
Thecc1EG005793 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38263683-38265682 Theobroma cacao
Thecc1EG005793 2.0kb downstream 2.0kb downstream 4887 true scaffold_1: 38265683-38270569 Theobroma cacao
Thecc1EG005793 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38268570-38270569 Theobroma cacao
Thecc1EG005793 5.0kb upstream 5.0kb upstream 7887 true scaffold_1: 38260683-38268569 Theobroma cacao
Thecc1EG005793 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38260683-38265682 Theobroma cacao
Thecc1EG005793 5.0kb downstream 5.0kb downstream 7887 true scaffold_1: 38265683-38273569 Theobroma cacao
Thecc1EG005793 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38268570-38273569 Theobroma cacao
Thecc1EG005793 10.0kb upstream 10.0kb upstream 12887 true scaffold_1: 38255683-38268569 Theobroma cacao
Thecc1EG005793 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38255683-38265682 Theobroma cacao
Thecc1EG005793 10.0kb downstream 10.0kb downstream 12887 true scaffold_1: 38265683-38278569 Theobroma cacao
Thecc1EG005793 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38268570-38278569 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841535 5264 Brassicales-Malvales View MSA
124350800 5266 SBM View MSA
124254542 5268 Malvidae View MSA
124061997 5270 Rosid View MSA
123740255 5271 Pentapetalae View MSA
122794687 5272 Eudicot View MSA
122044220 5273 Angiosperm View MSA
121344694 5274 Embryophyte View MSA
123428242 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain