Gene : Thecc1EG005795 T. cacao v1.1

Defline:  (1 of 1) PTHR34537:SF2 - FERREDOXIN-LIKE PROTEIN Genomic Order:  3974
Name:  ? Thecc1EG005795 Secondary Identifier:  ? PAC:27431305

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005795 0.5kb upstream 0.5kb upstream 3927 true scaffold_1: 38275762-38279688 Theobroma cacao
Thecc1EG005795 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38279189-38279688 Theobroma cacao
Thecc1EG005795 0.5kb downstream 0.5kb downstream 3927 true scaffold_1: 38275262-38279188 Theobroma cacao
Thecc1EG005795 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38275262-38275761 Theobroma cacao
Thecc1EG005795 1.0kb upstream 1.0kb upstream 4427 true scaffold_1: 38275762-38280188 Theobroma cacao
Thecc1EG005795 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38279189-38280188 Theobroma cacao
Thecc1EG005795 1.0kb downstream 1.0kb downstream 4427 true scaffold_1: 38274762-38279188 Theobroma cacao
Thecc1EG005795 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38274762-38275761 Theobroma cacao
Thecc1EG005795 2.0kb upstream 2.0kb upstream 5427 true scaffold_1: 38275762-38281188 Theobroma cacao
Thecc1EG005795 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38279189-38281188 Theobroma cacao
Thecc1EG005795 2.0kb downstream 2.0kb downstream 5427 true scaffold_1: 38273762-38279188 Theobroma cacao
Thecc1EG005795 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38273762-38275761 Theobroma cacao
Thecc1EG005795 5.0kb upstream 5.0kb upstream 8427 true scaffold_1: 38275762-38284188 Theobroma cacao
Thecc1EG005795 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38279189-38284188 Theobroma cacao
Thecc1EG005795 5.0kb downstream 5.0kb downstream 8427 true scaffold_1: 38270762-38279188 Theobroma cacao
Thecc1EG005795 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38270762-38275761 Theobroma cacao
Thecc1EG005795 10.0kb upstream 10.0kb upstream 13427 true scaffold_1: 38275762-38289188 Theobroma cacao
Thecc1EG005795 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38279189-38289188 Theobroma cacao
Thecc1EG005795 10.0kb downstream 10.0kb downstream 13427 true scaffold_1: 38265762-38279188 Theobroma cacao
Thecc1EG005795 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38265762-38275761 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828330 5264 Brassicales-Malvales View MSA
124337610 5266 SBM View MSA
124248466 5268 Malvidae View MSA
124070213 5270 Rosid View MSA
123746811 5271 Pentapetalae View MSA
122794670 5272 Eudicot View MSA
122048192 5273 Angiosperm View MSA
121310879 5274 Embryophyte View MSA
123348261 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain