Gene : Thecc1EG042381 T. cacao v1.1
Defline:  High chlorophyll fluorescence 153 Genomic Order:  45
Name:  ? Thecc1EG042381 Secondary Identifier:  ? PAC:27442575
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042381 0.5kb upstream 0.5kb upstream 1404 true scaffold_10r: 294904-296307 Theobroma cacao
Thecc1EG042381 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 295808-296307 Theobroma cacao
Thecc1EG042381 0.5kb downstream 0.5kb downstream 1404 true scaffold_10r: 294404-295807 Theobroma cacao
Thecc1EG042381 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 294404-294903 Theobroma cacao
Thecc1EG042381 1.0kb upstream 1.0kb upstream 1904 true scaffold_10r: 294904-296807 Theobroma cacao
Thecc1EG042381 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 295808-296807 Theobroma cacao
Thecc1EG042381 1.0kb downstream 1.0kb downstream 1904 true scaffold_10r: 293904-295807 Theobroma cacao
Thecc1EG042381 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 293904-294903 Theobroma cacao
Thecc1EG042381 2.0kb upstream 2.0kb upstream 2904 true scaffold_10r: 294904-297807 Theobroma cacao
Thecc1EG042381 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 295808-297807 Theobroma cacao
Thecc1EG042381 2.0kb downstream 2.0kb downstream 2904 true scaffold_10r: 292904-295807 Theobroma cacao
Thecc1EG042381 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 292904-294903 Theobroma cacao
Thecc1EG042381 5.0kb upstream 5.0kb upstream 5904 true scaffold_10r: 294904-300807 Theobroma cacao
Thecc1EG042381 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 295808-300807 Theobroma cacao
Thecc1EG042381 5.0kb downstream 5.0kb downstream 5904 true scaffold_10r: 289904-295807 Theobroma cacao
Thecc1EG042381 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 289904-294903 Theobroma cacao
Thecc1EG042381 10.0kb upstream 10.0kb upstream 10904 true scaffold_10r: 294904-305807 Theobroma cacao
Thecc1EG042381 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 295808-305807 Theobroma cacao
Thecc1EG042381 10.0kb downstream 10.0kb downstream 10904 true scaffold_10r: 284904-295807 Theobroma cacao
Thecc1EG042381 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 284904-294903 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833784 5264 Brassicales-Malvales View MSA
124347444 5266 SBM View MSA
124237934 5268 Malvidae View MSA
124068196 5270 Rosid View MSA
123749169 5271 Pentapetalae View MSA
122787742 5272 Eudicot View MSA
122044964 5273 Angiosperm View MSA
121310373 5274 Embryophyte View MSA
123347874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain