Gene : Thecc1EG042373 T. cacao v1.1
Defline:  (1 of 1) 2.5.1.46 - Deoxyhypusine synthase / Spermidine dehydrogenase Genomic Order:  38
Name:  ? Thecc1EG042373 Secondary Identifier:  ? PAC:27443071
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5905 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042373 0.5kb upstream 0.5kb upstream 4539 true scaffold_10r: 240388-244926 Theobroma cacao
Thecc1EG042373 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 240388-240887 Theobroma cacao
Thecc1EG042373 0.5kb downstream 0.5kb downstream 4539 true scaffold_10r: 240888-245426 Theobroma cacao
Thecc1EG042373 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 244927-245426 Theobroma cacao
Thecc1EG042373 1.0kb upstream 1.0kb upstream 5039 true scaffold_10r: 239888-244926 Theobroma cacao
Thecc1EG042373 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 239888-240887 Theobroma cacao
Thecc1EG042373 1.0kb downstream 1.0kb downstream 5039 true scaffold_10r: 240888-245926 Theobroma cacao
Thecc1EG042373 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 244927-245926 Theobroma cacao
Thecc1EG042373 2.0kb upstream 2.0kb upstream 6039 true scaffold_10r: 238888-244926 Theobroma cacao
Thecc1EG042373 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 238888-240887 Theobroma cacao
Thecc1EG042373 2.0kb downstream 2.0kb downstream 6039 true scaffold_10r: 240888-246926 Theobroma cacao
Thecc1EG042373 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 244927-246926 Theobroma cacao
Thecc1EG042373 5.0kb upstream 5.0kb upstream 9039 true scaffold_10r: 235888-244926 Theobroma cacao
Thecc1EG042373 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 235888-240887 Theobroma cacao
Thecc1EG042373 5.0kb downstream 5.0kb downstream 9039 true scaffold_10r: 240888-249926 Theobroma cacao
Thecc1EG042373 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 244927-249926 Theobroma cacao
Thecc1EG042373 10.0kb upstream 10.0kb upstream 14039 true scaffold_10r: 230888-244926 Theobroma cacao
Thecc1EG042373 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 230888-240887 Theobroma cacao
Thecc1EG042373 10.0kb downstream 10.0kb downstream 14039 true scaffold_10r: 240888-254926 Theobroma cacao
Thecc1EG042373 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 244927-254926 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829955 5264 Brassicales-Malvales View MSA
124340739 5266 SBM View MSA
124241144 5268 Malvidae View MSA
124061456 5270 Rosid View MSA
123736781 5271 Pentapetalae View MSA
122791984 5272 Eudicot View MSA
122048082 5273 Angiosperm View MSA
121345605 5274 Embryophyte View MSA
123427897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain