Gene : Thecc1EG042365 T. cacao v1.1
Defline:  (1 of 2) PTHR11728:SF17 - 6-PHOSPHOGLUCONATE DEHYDROGENASE-LIKE PROTEIN Genomic Order:  31
Name:  ? Thecc1EG042365 Secondary Identifier:  ? PAC:27441360
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6118 Theobroma cacao pathologic  
Tcacao PWY-7411 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042365 0.5kb upstream 0.5kb upstream 3817 true scaffold_10r: 197453-201269 Theobroma cacao
Thecc1EG042365 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 200770-201269 Theobroma cacao
Thecc1EG042365 0.5kb downstream 0.5kb downstream 3817 true scaffold_10r: 196953-200769 Theobroma cacao
Thecc1EG042365 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 196953-197452 Theobroma cacao
Thecc1EG042365 1.0kb upstream 1.0kb upstream 4317 true scaffold_10r: 197453-201769 Theobroma cacao
Thecc1EG042365 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 200770-201769 Theobroma cacao
Thecc1EG042365 1.0kb downstream 1.0kb downstream 4317 true scaffold_10r: 196453-200769 Theobroma cacao
Thecc1EG042365 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 196453-197452 Theobroma cacao
Thecc1EG042365 2.0kb upstream 2.0kb upstream 5317 true scaffold_10r: 197453-202769 Theobroma cacao
Thecc1EG042365 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 200770-202769 Theobroma cacao
Thecc1EG042365 2.0kb downstream 2.0kb downstream 5317 true scaffold_10r: 195453-200769 Theobroma cacao
Thecc1EG042365 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 195453-197452 Theobroma cacao
Thecc1EG042365 5.0kb upstream 5.0kb upstream 8317 true scaffold_10r: 197453-205769 Theobroma cacao
Thecc1EG042365 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 200770-205769 Theobroma cacao
Thecc1EG042365 5.0kb downstream 5.0kb downstream 8317 true scaffold_10r: 192453-200769 Theobroma cacao
Thecc1EG042365 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 192453-197452 Theobroma cacao
Thecc1EG042365 10.0kb upstream 10.0kb upstream 13317 true scaffold_10r: 197453-210769 Theobroma cacao
Thecc1EG042365 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 200770-210769 Theobroma cacao
Thecc1EG042365 10.0kb downstream 10.0kb downstream 13317 true scaffold_10r: 187453-200769 Theobroma cacao
Thecc1EG042365 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 187453-197452 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825578 5264 Brassicales-Malvales View MSA
124349614 5266 SBM View MSA
124245470 5268 Malvidae View MSA
124069658 5270 Rosid View MSA
123738520 5271 Pentapetalae View MSA
122790520 5272 Eudicot View MSA
122046820 5273 Angiosperm View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain