Gene : Thecc1EG042348 T. cacao v1.1

Defline:  (1 of 1) K11271 - sister chromatid cohesion protein DCC1 (DSCC1, DCC1) Genomic Order:  17
Name:  ? Thecc1EG042348 Secondary Identifier:  ? PAC:27442910

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042348 0.5kb upstream 0.5kb upstream 3179 true scaffold_10r: 139928-143106 Theobroma cacao
Thecc1EG042348 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 142607-143106 Theobroma cacao
Thecc1EG042348 0.5kb downstream 0.5kb downstream 3179 true scaffold_10r: 139428-142606 Theobroma cacao
Thecc1EG042348 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 139428-139927 Theobroma cacao
Thecc1EG042348 1.0kb upstream 1.0kb upstream 3679 true scaffold_10r: 139928-143606 Theobroma cacao
Thecc1EG042348 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 142607-143606 Theobroma cacao
Thecc1EG042348 1.0kb downstream 1.0kb downstream 3679 true scaffold_10r: 138928-142606 Theobroma cacao
Thecc1EG042348 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 138928-139927 Theobroma cacao
Thecc1EG042348 2.0kb upstream 2.0kb upstream 4679 true scaffold_10r: 139928-144606 Theobroma cacao
Thecc1EG042348 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 142607-144606 Theobroma cacao
Thecc1EG042348 2.0kb downstream 2.0kb downstream 4679 true scaffold_10r: 137928-142606 Theobroma cacao
Thecc1EG042348 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 137928-139927 Theobroma cacao
Thecc1EG042348 5.0kb upstream 5.0kb upstream 7679 true scaffold_10r: 139928-147606 Theobroma cacao
Thecc1EG042348 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 142607-147606 Theobroma cacao
Thecc1EG042348 5.0kb downstream 5.0kb downstream 7679 true scaffold_10r: 134928-142606 Theobroma cacao
Thecc1EG042348 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 134928-139927 Theobroma cacao
Thecc1EG042348 10.0kb upstream 10.0kb upstream 12679 true scaffold_10r: 139928-152606 Theobroma cacao
Thecc1EG042348 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 142607-152606 Theobroma cacao
Thecc1EG042348 10.0kb downstream 10.0kb downstream 12679 true scaffold_10r: 129928-142606 Theobroma cacao
Thecc1EG042348 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 129928-139927 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830562 5264 Brassicales-Malvales View MSA
124337546 5266 SBM View MSA
124241698 5268 Malvidae View MSA
124066083 5270 Rosid View MSA
123738990 5271 Pentapetalae View MSA
122785967 5272 Eudicot View MSA
122045586 5273 Angiosperm View MSA
121346207 5274 Embryophyte View MSA
123425480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain