Gene : Thecc1EG046994 T. cacao v1.1
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  3834
Name:  ? Thecc1EG046994 Secondary Identifier:  ? PAC:27434147
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046994 0.5kb upstream 0.5kb upstream 2157 true scaffold_1: 37573164-37575320 Theobroma cacao
Thecc1EG046994 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37573164-37573663 Theobroma cacao
Thecc1EG046994 0.5kb downstream 0.5kb downstream 2157 true scaffold_1: 37573664-37575820 Theobroma cacao
Thecc1EG046994 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37575321-37575820 Theobroma cacao
Thecc1EG046994 1.0kb upstream 1.0kb upstream 2657 true scaffold_1: 37572664-37575320 Theobroma cacao
Thecc1EG046994 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37572664-37573663 Theobroma cacao
Thecc1EG046994 1.0kb downstream 1.0kb downstream 2657 true scaffold_1: 37573664-37576320 Theobroma cacao
Thecc1EG046994 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37575321-37576320 Theobroma cacao
Thecc1EG046994 2.0kb upstream 2.0kb upstream 3657 true scaffold_1: 37571664-37575320 Theobroma cacao
Thecc1EG046994 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37571664-37573663 Theobroma cacao
Thecc1EG046994 2.0kb downstream 2.0kb downstream 3657 true scaffold_1: 37573664-37577320 Theobroma cacao
Thecc1EG046994 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37575321-37577320 Theobroma cacao
Thecc1EG046994 5.0kb upstream 5.0kb upstream 6657 true scaffold_1: 37568664-37575320 Theobroma cacao
Thecc1EG046994 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37568664-37573663 Theobroma cacao
Thecc1EG046994 5.0kb downstream 5.0kb downstream 6657 true scaffold_1: 37573664-37580320 Theobroma cacao
Thecc1EG046994 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37575321-37580320 Theobroma cacao
Thecc1EG046994 10.0kb upstream 10.0kb upstream 11657 true scaffold_1: 37563664-37575320 Theobroma cacao
Thecc1EG046994 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37563664-37573663 Theobroma cacao
Thecc1EG046994 10.0kb downstream 10.0kb downstream 11657 true scaffold_1: 37573664-37585320 Theobroma cacao
Thecc1EG046994 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37575321-37585320 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828982 5264 Brassicales-Malvales View MSA
124336806 5266 SBM View MSA
124239117 5268 Malvidae View MSA
124068304 5270 Rosid View MSA
123739380 5271 Pentapetalae View MSA
122792095 5272 Eudicot View MSA
122045794 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain