Gene : Thecc1EG046987 T. cacao v1.1
Defline:  (1 of 2) PTHR31867:SF34 - EXPANSIN-A17-RELATED Genomic Order:  3260
Name:  ? Thecc1EG046987 Secondary Identifier:  ? PAC:27436784
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046987 0.5kb upstream 0.5kb upstream 1914 true scaffold_1: 34446979-34448892 Theobroma cacao
Thecc1EG046987 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34448393-34448892 Theobroma cacao
Thecc1EG046987 0.5kb downstream 0.5kb downstream 1914 true scaffold_1: 34446479-34448392 Theobroma cacao
Thecc1EG046987 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34446479-34446978 Theobroma cacao
Thecc1EG046987 1.0kb upstream 1.0kb upstream 2414 true scaffold_1: 34446979-34449392 Theobroma cacao
Thecc1EG046987 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34448393-34449392 Theobroma cacao
Thecc1EG046987 1.0kb downstream 1.0kb downstream 2414 true scaffold_1: 34445979-34448392 Theobroma cacao
Thecc1EG046987 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34445979-34446978 Theobroma cacao
Thecc1EG046987 2.0kb upstream 2.0kb upstream 3414 true scaffold_1: 34446979-34450392 Theobroma cacao
Thecc1EG046987 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34448393-34450392 Theobroma cacao
Thecc1EG046987 2.0kb downstream 2.0kb downstream 3414 true scaffold_1: 34444979-34448392 Theobroma cacao
Thecc1EG046987 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34444979-34446978 Theobroma cacao
Thecc1EG046987 5.0kb upstream 5.0kb upstream 6414 true scaffold_1: 34446979-34453392 Theobroma cacao
Thecc1EG046987 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34448393-34453392 Theobroma cacao
Thecc1EG046987 5.0kb downstream 5.0kb downstream 6414 true scaffold_1: 34441979-34448392 Theobroma cacao
Thecc1EG046987 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34441979-34446978 Theobroma cacao
Thecc1EG046987 10.0kb upstream 10.0kb upstream 11414 true scaffold_1: 34446979-34458392 Theobroma cacao
Thecc1EG046987 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34448393-34458392 Theobroma cacao
Thecc1EG046987 10.0kb downstream 10.0kb downstream 11414 true scaffold_1: 34436979-34448392 Theobroma cacao
Thecc1EG046987 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34436979-34446978 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026644 5273 Angiosperm View MSA
123837812 5264 Brassicales-Malvales View MSA
124337483 5266 SBM View MSA
124241599 5268 Malvidae View MSA
124060706 5270 Rosid View MSA
123647556 5271 Pentapetalae View MSA
122790037 5272 Eudicot View MSA
123429074 5275 Viridiplantae View MSA
121296447 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain