Gene : Thecc1EG046707 T. cacao v1.1
Defline:  (1 of 4) K00559 - sterol 24-C-methyltransferase (E2.1.1.41, SMT1, ERG6) Genomic Order:  4028
Name:  ? Thecc1EG046707 Secondary Identifier:  ? PAC:27433749
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-2541 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046707 0.5kb upstream 0.5kb upstream 4578 true scaffold_1: 38523305-38527882 Theobroma cacao
Thecc1EG046707 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38527383-38527882 Theobroma cacao
Thecc1EG046707 0.5kb downstream 0.5kb downstream 4578 true scaffold_1: 38522805-38527382 Theobroma cacao
Thecc1EG046707 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38522805-38523304 Theobroma cacao
Thecc1EG046707 1.0kb upstream 1.0kb upstream 5078 true scaffold_1: 38523305-38528382 Theobroma cacao
Thecc1EG046707 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38527383-38528382 Theobroma cacao
Thecc1EG046707 1.0kb downstream 1.0kb downstream 5078 true scaffold_1: 38522305-38527382 Theobroma cacao
Thecc1EG046707 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38522305-38523304 Theobroma cacao
Thecc1EG046707 2.0kb upstream 2.0kb upstream 6078 true scaffold_1: 38523305-38529382 Theobroma cacao
Thecc1EG046707 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38527383-38529382 Theobroma cacao
Thecc1EG046707 2.0kb downstream 2.0kb downstream 6078 true scaffold_1: 38521305-38527382 Theobroma cacao
Thecc1EG046707 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38521305-38523304 Theobroma cacao
Thecc1EG046707 5.0kb upstream 5.0kb upstream 9078 true scaffold_1: 38523305-38532382 Theobroma cacao
Thecc1EG046707 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38527383-38532382 Theobroma cacao
Thecc1EG046707 5.0kb downstream 5.0kb downstream 9078 true scaffold_1: 38518305-38527382 Theobroma cacao
Thecc1EG046707 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38518305-38523304 Theobroma cacao
Thecc1EG046707 10.0kb upstream 10.0kb upstream 14078 true scaffold_1: 38523305-38537382 Theobroma cacao
Thecc1EG046707 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38527383-38537382 Theobroma cacao
Thecc1EG046707 10.0kb downstream 10.0kb downstream 14078 true scaffold_1: 38513305-38527382 Theobroma cacao
Thecc1EG046707 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38513305-38523304 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
123827735 5264 Brassicales-Malvales View MSA
124350111 5266 SBM View MSA
124248608 5268 Malvidae View MSA
124073694 5270 Rosid View MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain