Gene : Thecc1EG046686 T. cacao v1.1
Defline:  (1 of 3) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  1447
Name:  ? Thecc1EG046686 Secondary Identifier:  ? PAC:27435530
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao BRANCHED-CHAIN-AA-SYN-PWY Theobroma cacao pathologic  
Tcacao ILEUSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3001 Theobroma cacao pathologic  
Tcacao VALSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046686 0.5kb upstream 0.5kb upstream 4281 true scaffold_1: 8773356-8777636 Theobroma cacao
Thecc1EG046686 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8773356-8773855 Theobroma cacao
Thecc1EG046686 0.5kb downstream 0.5kb downstream 4281 true scaffold_1: 8773856-8778136 Theobroma cacao
Thecc1EG046686 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8777637-8778136 Theobroma cacao
Thecc1EG046686 1.0kb upstream 1.0kb upstream 4781 true scaffold_1: 8772856-8777636 Theobroma cacao
Thecc1EG046686 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8772856-8773855 Theobroma cacao
Thecc1EG046686 1.0kb downstream 1.0kb downstream 4781 true scaffold_1: 8773856-8778636 Theobroma cacao
Thecc1EG046686 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8777637-8778636 Theobroma cacao
Thecc1EG046686 2.0kb upstream 2.0kb upstream 5781 true scaffold_1: 8771856-8777636 Theobroma cacao
Thecc1EG046686 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8771856-8773855 Theobroma cacao
Thecc1EG046686 2.0kb downstream 2.0kb downstream 5781 true scaffold_1: 8773856-8779636 Theobroma cacao
Thecc1EG046686 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8777637-8779636 Theobroma cacao
Thecc1EG046686 5.0kb upstream 5.0kb upstream 8781 true scaffold_1: 8768856-8777636 Theobroma cacao
Thecc1EG046686 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8768856-8773855 Theobroma cacao
Thecc1EG046686 5.0kb downstream 5.0kb downstream 8781 true scaffold_1: 8773856-8782636 Theobroma cacao
Thecc1EG046686 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8777637-8782636 Theobroma cacao
Thecc1EG046686 10.0kb upstream 10.0kb upstream 13781 true scaffold_1: 8763856-8777636 Theobroma cacao
Thecc1EG046686 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8763856-8773855 Theobroma cacao
Thecc1EG046686 10.0kb downstream 10.0kb downstream 13781 true scaffold_1: 8773856-8787636 Theobroma cacao
Thecc1EG046686 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8777637-8787636 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828492 5264 Brassicales-Malvales View MSA
124339638 5266 SBM View MSA
124249053 5268 Malvidae View MSA
124060504 5270 Rosid View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain