Gene : Thecc1EG005945 T. cacao v1.1
Defline:  (1 of 1) PTHR37173:SF1 - HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  4110
Name:  ? Thecc1EG005945 Secondary Identifier:  ? PAC:27434383
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005945 0.5kb upstream 0.5kb upstream 4977 true scaffold_1: 38925708-38930684 Theobroma cacao
Thecc1EG005945 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38925708-38926207 Theobroma cacao
Thecc1EG005945 0.5kb downstream 0.5kb downstream 4977 true scaffold_1: 38926208-38931184 Theobroma cacao
Thecc1EG005945 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38930685-38931184 Theobroma cacao
Thecc1EG005945 1.0kb upstream 1.0kb upstream 5477 true scaffold_1: 38925208-38930684 Theobroma cacao
Thecc1EG005945 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38925208-38926207 Theobroma cacao
Thecc1EG005945 1.0kb downstream 1.0kb downstream 5477 true scaffold_1: 38926208-38931684 Theobroma cacao
Thecc1EG005945 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38930685-38931684 Theobroma cacao
Thecc1EG005945 2.0kb upstream 2.0kb upstream 6477 true scaffold_1: 38924208-38930684 Theobroma cacao
Thecc1EG005945 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38924208-38926207 Theobroma cacao
Thecc1EG005945 2.0kb downstream 2.0kb downstream 6477 true scaffold_1: 38926208-38932684 Theobroma cacao
Thecc1EG005945 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38930685-38932684 Theobroma cacao
Thecc1EG005945 5.0kb upstream 5.0kb upstream 9477 true scaffold_1: 38921208-38930684 Theobroma cacao
Thecc1EG005945 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38921208-38926207 Theobroma cacao
Thecc1EG005945 5.0kb downstream 5.0kb downstream 9477 true scaffold_1: 38926208-38935684 Theobroma cacao
Thecc1EG005945 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38930685-38935684 Theobroma cacao
Thecc1EG005945 10.0kb upstream 10.0kb upstream 14477 true scaffold_1: 38916208-38930684 Theobroma cacao
Thecc1EG005945 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38916208-38926207 Theobroma cacao
Thecc1EG005945 10.0kb downstream 10.0kb downstream 14477 true scaffold_1: 38926208-38940684 Theobroma cacao
Thecc1EG005945 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38930685-38940684 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834376 5264 Brassicales-Malvales View MSA
124341089 5266 SBM View MSA
124250614 5268 Malvidae View MSA
124065426 5270 Rosid View MSA
123746195 5271 Pentapetalae View MSA
122787235 5272 Eudicot View MSA
122045095 5273 Angiosperm View MSA
121345714 5274 Embryophyte View MSA
123425917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain