Gene : Thecc1EG005932 T. cacao v1.1
Defline:  (1 of 10) K13126 - polyadenylate-binding protein (PABPC) Genomic Order:  4098
Name:  ? Thecc1EG005932 Secondary Identifier:  ? PAC:27433902
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005932 0.5kb upstream 0.5kb upstream 3053 true scaffold_1: 38860677-38863729 Theobroma cacao
Thecc1EG005932 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38863230-38863729 Theobroma cacao
Thecc1EG005932 0.5kb downstream 0.5kb downstream 3053 true scaffold_1: 38860177-38863229 Theobroma cacao
Thecc1EG005932 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38860177-38860676 Theobroma cacao
Thecc1EG005932 1.0kb upstream 1.0kb upstream 3553 true scaffold_1: 38860677-38864229 Theobroma cacao
Thecc1EG005932 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38863230-38864229 Theobroma cacao
Thecc1EG005932 1.0kb downstream 1.0kb downstream 3553 true scaffold_1: 38859677-38863229 Theobroma cacao
Thecc1EG005932 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38859677-38860676 Theobroma cacao
Thecc1EG005932 2.0kb upstream 2.0kb upstream 4553 true scaffold_1: 38860677-38865229 Theobroma cacao
Thecc1EG005932 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38863230-38865229 Theobroma cacao
Thecc1EG005932 2.0kb downstream 2.0kb downstream 4553 true scaffold_1: 38858677-38863229 Theobroma cacao
Thecc1EG005932 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38858677-38860676 Theobroma cacao
Thecc1EG005932 5.0kb upstream 5.0kb upstream 7553 true scaffold_1: 38860677-38868229 Theobroma cacao
Thecc1EG005932 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38863230-38868229 Theobroma cacao
Thecc1EG005932 5.0kb downstream 5.0kb downstream 7553 true scaffold_1: 38855677-38863229 Theobroma cacao
Thecc1EG005932 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38855677-38860676 Theobroma cacao
Thecc1EG005932 10.0kb upstream 10.0kb upstream 12553 true scaffold_1: 38860677-38873229 Theobroma cacao
Thecc1EG005932 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38863230-38873229 Theobroma cacao
Thecc1EG005932 10.0kb downstream 10.0kb downstream 12553 true scaffold_1: 38850677-38863229 Theobroma cacao
Thecc1EG005932 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38850677-38860676 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026282 5273 Angiosperm View MSA
123840131 5264 Brassicales-Malvales View MSA
124342929 5266 SBM View MSA
124238526 5268 Malvidae View MSA
124063471 5270 Rosid View MSA
123737164 5271 Pentapetalae View MSA
122793364 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121296259 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain