Gene : Thecc1EG042444 T. cacao v1.1
Defline:  (1 of 1) K14809 - ATP-dependent RNA helicase DDX55/SPB4 [EC:3.6.4.13] (DDX55, SPB4) Genomic Order:  102
Name:  ? Thecc1EG042444 Secondary Identifier:  ? PAC:27441762
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042444 0.5kb upstream 0.5kb upstream 4823 true scaffold_10r: 558356-563178 Theobroma cacao
Thecc1EG042444 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 558356-558855 Theobroma cacao
Thecc1EG042444 0.5kb downstream 0.5kb downstream 4823 true scaffold_10r: 558856-563678 Theobroma cacao
Thecc1EG042444 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 563179-563678 Theobroma cacao
Thecc1EG042444 1.0kb upstream 1.0kb upstream 5323 true scaffold_10r: 557856-563178 Theobroma cacao
Thecc1EG042444 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 557856-558855 Theobroma cacao
Thecc1EG042444 1.0kb downstream 1.0kb downstream 5323 true scaffold_10r: 558856-564178 Theobroma cacao
Thecc1EG042444 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 563179-564178 Theobroma cacao
Thecc1EG042444 2.0kb upstream 2.0kb upstream 6323 true scaffold_10r: 556856-563178 Theobroma cacao
Thecc1EG042444 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 556856-558855 Theobroma cacao
Thecc1EG042444 2.0kb downstream 2.0kb downstream 6323 true scaffold_10r: 558856-565178 Theobroma cacao
Thecc1EG042444 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 563179-565178 Theobroma cacao
Thecc1EG042444 5.0kb upstream 5.0kb upstream 9323 true scaffold_10r: 553856-563178 Theobroma cacao
Thecc1EG042444 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 553856-558855 Theobroma cacao
Thecc1EG042444 5.0kb downstream 5.0kb downstream 9323 true scaffold_10r: 558856-568178 Theobroma cacao
Thecc1EG042444 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 563179-568178 Theobroma cacao
Thecc1EG042444 10.0kb upstream 10.0kb upstream 14323 true scaffold_10r: 548856-563178 Theobroma cacao
Thecc1EG042444 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 548856-558855 Theobroma cacao
Thecc1EG042444 10.0kb downstream 10.0kb downstream 14323 true scaffold_10r: 558856-573178 Theobroma cacao
Thecc1EG042444 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 563179-573178 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830006 5264 Brassicales-Malvales View MSA
124339967 5266 SBM View MSA
124243555 5268 Malvidae View MSA
124068016 5270 Rosid View MSA
123739491 5271 Pentapetalae View MSA
122792074 5272 Eudicot View MSA
122042767 5273 Angiosperm View MSA
123429160 5275 Viridiplantae View MSA
121346858 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain