Gene : Thecc1EG042443 T. cacao v1.1
Defline:  (1 of 1) PTHR15071 - CATION-DEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR Genomic Order:  101
Name:  ? Thecc1EG042443 Secondary Identifier:  ? PAC:27442999
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-66 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042443 0.5kb upstream 0.5kb upstream 5107 true scaffold_10r: 554091-559197 Theobroma cacao
Thecc1EG042443 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 558698-559197 Theobroma cacao
Thecc1EG042443 0.5kb downstream 0.5kb downstream 5107 true scaffold_10r: 553591-558697 Theobroma cacao
Thecc1EG042443 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 553591-554090 Theobroma cacao
Thecc1EG042443 1.0kb upstream 1.0kb upstream 5607 true scaffold_10r: 554091-559697 Theobroma cacao
Thecc1EG042443 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 558698-559697 Theobroma cacao
Thecc1EG042443 1.0kb downstream 1.0kb downstream 5607 true scaffold_10r: 553091-558697 Theobroma cacao
Thecc1EG042443 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 553091-554090 Theobroma cacao
Thecc1EG042443 2.0kb upstream 2.0kb upstream 6607 true scaffold_10r: 554091-560697 Theobroma cacao
Thecc1EG042443 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 558698-560697 Theobroma cacao
Thecc1EG042443 2.0kb downstream 2.0kb downstream 6607 true scaffold_10r: 552091-558697 Theobroma cacao
Thecc1EG042443 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 552091-554090 Theobroma cacao
Thecc1EG042443 5.0kb upstream 5.0kb upstream 9607 true scaffold_10r: 554091-563697 Theobroma cacao
Thecc1EG042443 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 558698-563697 Theobroma cacao
Thecc1EG042443 5.0kb downstream 5.0kb downstream 9607 true scaffold_10r: 549091-558697 Theobroma cacao
Thecc1EG042443 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 549091-554090 Theobroma cacao
Thecc1EG042443 10.0kb upstream 10.0kb upstream 14607 true scaffold_10r: 554091-568697 Theobroma cacao
Thecc1EG042443 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 558698-568697 Theobroma cacao
Thecc1EG042443 10.0kb downstream 10.0kb downstream 14607 true scaffold_10r: 544091-558697 Theobroma cacao
Thecc1EG042443 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 544091-554090 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841049 5264 Brassicales-Malvales View MSA
124343986 5266 SBM View MSA
124236930 5268 Malvidae View MSA
124061668 5270 Rosid View MSA
123744044 5271 Pentapetalae View MSA
122786177 5272 Eudicot View MSA
122046293 5273 Angiosperm View MSA
121344129 5274 Embryophyte View MSA
123379979 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain