Gene : Thecc1EG042419 T. cacao v1.1
Defline:  (1 of 7) PF07145 - Ataxin-2 C-terminal region (PAM2) Genomic Order:  81
Name:  ? Thecc1EG042419 Secondary Identifier:  ? PAC:27443236
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042419 0.5kb upstream 0.5kb upstream 1304 true scaffold_10r: 452162-453465 Theobroma cacao
Thecc1EG042419 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 452966-453465 Theobroma cacao
Thecc1EG042419 0.5kb downstream 0.5kb downstream 1304 true scaffold_10r: 451662-452965 Theobroma cacao
Thecc1EG042419 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 451662-452161 Theobroma cacao
Thecc1EG042419 1.0kb upstream 1.0kb upstream 1804 true scaffold_10r: 452162-453965 Theobroma cacao
Thecc1EG042419 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 452966-453965 Theobroma cacao
Thecc1EG042419 1.0kb downstream 1.0kb downstream 1804 true scaffold_10r: 451162-452965 Theobroma cacao
Thecc1EG042419 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 451162-452161 Theobroma cacao
Thecc1EG042419 2.0kb upstream 2.0kb upstream 2804 true scaffold_10r: 452162-454965 Theobroma cacao
Thecc1EG042419 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 452966-454965 Theobroma cacao
Thecc1EG042419 2.0kb downstream 2.0kb downstream 2804 true scaffold_10r: 450162-452965 Theobroma cacao
Thecc1EG042419 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 450162-452161 Theobroma cacao
Thecc1EG042419 5.0kb upstream 5.0kb upstream 5804 true scaffold_10r: 452162-457965 Theobroma cacao
Thecc1EG042419 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 452966-457965 Theobroma cacao
Thecc1EG042419 5.0kb downstream 5.0kb downstream 5804 true scaffold_10r: 447162-452965 Theobroma cacao
Thecc1EG042419 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 447162-452161 Theobroma cacao
Thecc1EG042419 10.0kb upstream 10.0kb upstream 10804 true scaffold_10r: 452162-462965 Theobroma cacao
Thecc1EG042419 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 452966-462965 Theobroma cacao
Thecc1EG042419 10.0kb downstream 10.0kb downstream 10804 true scaffold_10r: 442162-452965 Theobroma cacao
Thecc1EG042419 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 442162-452161 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825874 5264 Brassicales-Malvales View MSA
124349147 5266 SBM View MSA
124252923 5268 Malvidae View MSA
124070675 5270 Rosid View MSA
123742369 5271 Pentapetalae View MSA
122796171 5272 Eudicot View MSA
122048247 5273 Angiosperm View MSA
121345899 5274 Embryophyte View MSA
123380287 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain