Gene : Thecc1EG042569 T. cacao v1.1
Defline:  (1 of 2) K02941 - large subunit ribosomal protein LP0 (RP-LP0, RPLP0) Genomic Order:  219
Name:  ? Thecc1EG042569 Secondary Identifier:  ? PAC:27442387
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042569 0.5kb upstream 0.5kb upstream 4418 true scaffold_10r: 1208749-1213166 Theobroma cacao
Thecc1EG042569 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 1208749-1209248 Theobroma cacao
Thecc1EG042569 0.5kb downstream 0.5kb downstream 4418 true scaffold_10r: 1209249-1213666 Theobroma cacao
Thecc1EG042569 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 1213167-1213666 Theobroma cacao
Thecc1EG042569 1.0kb upstream 1.0kb upstream 4918 true scaffold_10r: 1208249-1213166 Theobroma cacao
Thecc1EG042569 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 1208249-1209248 Theobroma cacao
Thecc1EG042569 1.0kb downstream 1.0kb downstream 4918 true scaffold_10r: 1209249-1214166 Theobroma cacao
Thecc1EG042569 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 1213167-1214166 Theobroma cacao
Thecc1EG042569 2.0kb upstream 2.0kb upstream 5918 true scaffold_10r: 1207249-1213166 Theobroma cacao
Thecc1EG042569 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 1207249-1209248 Theobroma cacao
Thecc1EG042569 2.0kb downstream 2.0kb downstream 5918 true scaffold_10r: 1209249-1215166 Theobroma cacao
Thecc1EG042569 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 1213167-1215166 Theobroma cacao
Thecc1EG042569 5.0kb upstream 5.0kb upstream 8918 true scaffold_10r: 1204249-1213166 Theobroma cacao
Thecc1EG042569 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 1204249-1209248 Theobroma cacao
Thecc1EG042569 5.0kb downstream 5.0kb downstream 8918 true scaffold_10r: 1209249-1218166 Theobroma cacao
Thecc1EG042569 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 1213167-1218166 Theobroma cacao
Thecc1EG042569 10.0kb upstream 10.0kb upstream 13918 true scaffold_10r: 1199249-1213166 Theobroma cacao
Thecc1EG042569 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 1199249-1209248 Theobroma cacao
Thecc1EG042569 10.0kb downstream 10.0kb downstream 13918 true scaffold_10r: 1209249-1223166 Theobroma cacao
Thecc1EG042569 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 1213167-1223166 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836746 5264 Brassicales-Malvales View MSA
124342925 5266 SBM View MSA
124243369 5268 Malvidae View MSA
124061567 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain